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PW_scaffold_38

Alias: PW_Methanogen_55_643_9

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_38_1
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(147..584)
DNA (438bp) protein (146aa)
rnc1; ribonuclease III (EC:3.1.26.3)
Ribonuclease III {ECO:0000313|EMBL:CCJ34955.1}; EC=3.1.26.3 {ECO:0000313|EMBL:CCJ34955.1};; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Met
Ribonuclease III
PW_scaffold_38_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(615..1286)
DNA (672bp) protein (224aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=671143 species="Bacteria; candidate division NC10; Candida
lolD; lipoprotein-releasing system ABC transporter ATP-binding protein lolD
Lipoprotein-releasing system (ABC transporter), ATP-binding protein lolD
PW_scaffold_38_3
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1279..2373)
DNA (1095bp) protein (365aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73303.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium
Uncharacterized protein
PW_scaffold_38_4
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2446..3453)
DNA (1008bp) protein (336aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV23476.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psych
Putative uncharacterized protein
PW_scaffold_38_5
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3682..5148)
DNA (1467bp) protein (489aa)
dihydropteroate synthase-like protein
Dihydropteroate synthase-related protein {ECO:0000313|EMBL:AEB68327.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Meth
Dihydropteroate synthase-related protein
PW_scaffold_38_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5238..6431)
DNA (1194bp) protein (398aa)
2-isopropylmalate synthase {ECO:0000313|EMBL:ABK15305.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ABK15305.1};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae
aksA; trans-homoaconitate synthase
2-isopropylmalate synthase
PW_scaffold_38_7
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6585..7868)
DNA (1284bp) protein (428aa)
Thiamine biosynthesis protein ThiC
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:AET63942.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosa
Thiamine biosynthesis protein ThiC
PW_scaffold_38_8
unknown

Not on your lists

comp(7925..8101)
DNA (177bp) protein (59aa)
PW_scaffold_38_9
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8139..9011
DNA (873bp) protein (291aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
hisG; ATP phosphoribosyltransferase
ATP phosphoribosyltransferase
PW_scaffold_38_10
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9025..9516
DNA (492bp) protein (164aa)
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ABK14635.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methano
Amino acid-binding ACT domain protein
PW_scaffold_38_11
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

9513..10334
DNA (822bp) protein (274aa)
hydrolase HAD superfamily
Soluble P-type ATPase
Tax=BJP_IG2069_Methanobacteriales_33_27
PW_scaffold_38_12
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10388..12298)
DNA (1911bp) protein (637aa)
RNA-binding protein, eukaryotic snRNP-like protein
Putative RNA-binding protein, eukaryotic snRNP-like protein {ECO:0000313|EMBL:AFC98797.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocel
Putative RNA-binding protein, eukaryotic snRNP-like protein
PW_scaffold_38_13
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(12447..12992)
DNA (546bp) protein (182aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG98273.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus D
UPF0200/UPF0201 protein AF_1395
PW_scaffold_38_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12989..13738)
DNA (750bp) protein (250aa)
Ribonucleotide reductase of class III (anaerobic), activating protein (EC:1.97.1.4)
Radical activating enzyme {ECO:0000313|EMBL:AAZ70004.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
Radical activating enzyme
PW_scaffold_38_15
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13743..16325)
DNA (2583bp) protein (861aa)
Oligosaccharyl transferase {ECO:0000313|EMBL:AKB77267.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
oligosaccharyl transferase
Oligosaccharyl transferase
PW_scaffold_38_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16344..17144)
DNA (801bp) protein (267aa)
RNase PH-related exoribonuclease
Probable exosome complex exonuclease 2
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_38_17
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17134..17961)
DNA (828bp) protein (276aa)
Exosome complex component Rrp41 {ECO:0000256|HAMAP-Rule:MF_00591}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00591};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Met
exosome complex exonuclease Rrp41
Probable exosome complex exonuclease 1
PW_scaffold_38_18
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17968..18669)
DNA (702bp) protein (234aa)
exosome complex RNA-binding protein Rrp4
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosae
Probable exosome complex RNA-binding protein 1
PW_scaffold_38_19
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(18678..19373)
DNA (696bp) protein (232aa)
putative RNA-associated protein
Shwachman-Bodian-Diamond syndrome protein {ECO:0000313|EMBL:ABK15139.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Met
Shwachman-Bodian-Diamond syndrome protein
PW_scaffold_38_20
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19373..20146)
DNA (774bp) protein (258aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha, archaeal (EC:3.4.25.1)
Proteasome subunit alpha
PW_scaffold_38_21
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20232..20573)
DNA (342bp) protein (114aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
ribonuclease P-like protein
Ribonuclease P protein component 2
PW_scaffold_38_22
unknown

Not on your lists

20612..21325
DNA (714bp) protein (238aa)
PW_scaffold_38_23
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21309..22442)
DNA (1134bp) protein (378aa)
MoaA {ECO:0000313|EMBL:KKG35412.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina f
radical SAM domain protein
Metallo cofactor biosynthesis protein
PW_scaffold_38_24
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22447..23352)
DNA (906bp) protein (302aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGB48516.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Meth
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
PW_scaffold_38_25
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23364..23753)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG81995.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
hypothetical protein
Conserved protein
PW_scaffold_38_26
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23766..24509)
DNA (744bp) protein (248aa)
3-isopropylmalate dehydratase {ECO:0000313|EMBL:KGK97646.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococc
hypothetical protein
DUF75-domain conserved archaeal protein
PW_scaffold_38_27
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

24875..25225
DNA (351bp) protein (117aa)
hypothetical protein Tax=RBG_13_Chloroflexi_56_8_curated
Putative uncharacterized protein
PW_scaffold_38_28
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25259..26191)
DNA (933bp) protein (311aa)
Cobalamin biosynthesis protein
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sou
Probable cobalamin biosynthesis protein CobD
PW_scaffold_38_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(26179..26445)
DNA (267bp) protein (89aa)
class I and II aminotransferase; K04720 threonine-phosphate decarboxylase [EC:4.1.1.81] Tax=RBG_16_Euryarchaeota_41_19_curated
histidinol-phosphate aminotransferase
Histidinol-phosphate aminotransferase
PW_scaffold_38_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26759..27049
DNA (291bp) protein (97aa)
Nucleoid protein MC1 {ECO:0000313|EMBL:KCZ72609.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" sou
nucleoid protein MC1
Non-histone chromosomal MC1 family protein
Displaying items 1-30 of 49 in total

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