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PW_scaffold_38_18

Organism: PW_Methanogen_55_53

near complete RP 31 / 55 MC: 1 BSCG 19 / 51 ASCG 36 / 38
Location: comp(17968..18669)

Top 3 Functional Annotations

Value Algorithm Source
exosome complex RNA-binding protein Rrp4 KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 215.0
  • Bit_score: 257
  • Evalue 3.80e-66
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosae UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 215.0
  • Bit_score: 257
  • Evalue 1.90e-65
Probable exosome complex RNA-binding protein 1 similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 256
  • Evalue 5.50e-66

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Taxonomy

Methanosaeta thermophila → Methanosaeta → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 702
ATGCGCATAGTGATTCCGGGCGAGCTGCTCTCCGAGGATGCCAAGCGGGCAGGCGAGGGCACGTATGTGGAGGACGGGAAGGTGTACTCCCTGCTCTATGGTGTTGCCCACGAGGGCAAGAGCATCCGTGTGATACCCCTCGAGGGCAAGTACATCCCCACGAGGGGCGACACCATAATAGGCATGGTGAGCGAACTCACACCGTTTGGGTGGGTGCTGGACATCGCCTCACCGTACGAGGGCTTTTTACACCTGTCCGAGTACCCGAAGAAGATAGACTCCGCGGACATGGAGCAGCATCTTACCATAGGGGACAGCGTCGTGGTGGGGGTGAAGGAGGTCGCACCCTCGATGCGGGTGATGCTCGAGCTCAAGGAGGGGGTCCCAAGGCCCCTGAAGGGCGGAAGGCTCATCGAGATCTCCCACACCAGGGTGCCAAGGCTGATAGGCAGGGGGGGCTCTATGATATCCATGCTCCAGCGGGAGACTGGATGCAGGCTGCTCGTGGGCCAGAACGGCAGGGTGTGGATTACAGGTCCCAGAAGGCAGGTATCCCTCGTGGCGGACCTCGTGGAGATGATAGAGCGTGAGGCACACACCCCTGGGCTCACCGACAGGGTGCTCGCGAAGATAAGGGAGCACAGGGAGCGGGAGCCCAAGCAGAGAGCGGAAACAGACTTTCTGGACGAGCTTCTTAAGTAA
PROTEIN sequence
Length: 234
MRIVIPGELLSEDAKRAGEGTYVEDGKVYSLLYGVAHEGKSIRVIPLEGKYIPTRGDTIIGMVSELTPFGWVLDIASPYEGFLHLSEYPKKIDSADMEQHLTIGDSVVVGVKEVAPSMRVMLELKEGVPRPLKGGRLIEISHTRVPRLIGRGGSMISMLQRETGCRLLVGQNGRVWITGPRRQVSLVADLVEMIEREAHTPGLTDRVLAKIREHREREPKQRAETDFLDELLK*