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PW_scaffold_78_17

Organism: PW_Methanogen_55_53

near complete RP 31 / 55 MC: 1 BSCG 19 / 51 ASCG 36 / 38
Location: comp(16911..17720)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 264.0
  • Bit_score: 264
  • Evalue 2.30e-67
pseudouridylate synthase I KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 264.0
  • Bit_score: 262
  • Evalue 1.80e-67
tRNA pseudouridine synthase A similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 261
  • Evalue 2.60e-67

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Taxonomy

Methanosarcina sp. MTP4 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 810
ATGAGAATAGCGCTTAGACTCGCCTACATGGGCACCCAGTGCTCTGGGTTTCAGATACAGCCCGATGTGCCCACTGTGGAGACCTATCTCTTTGAGGCTCTCTCGGCACTTGGCATCATGGACGATCCCAAGAGGGCTGCCTATGCGAGGGCATCCAGGACAGATGCGGGAGTGCACGCCCTCGGACAGGTGGTGGCATTCAACACACCACATCCAGAAAGAGCCCTTCCAAAGGCCATCAACGCCTACCTTCCTCCCTTCATATGGTGCTGGGCACGTGCCATCGTTTCACCCGAGTTTAATCCCCGATATGATGCAAAGGAGAGGGTATATGAGTATATCCTGTATAACGAGGGCTACGACATACGGGCGATAAGAAGGGCGTGTAGGATGCTGGAAGGAGAGCACGACTTTGCCAACTTTGCGAGCGTCGAGGACGACAATGGCAGCACCATCAGGAGGATAAACCAGATAAAAGTCAGGCTGGATGGAGAGTTCGTGCACCTCACCATCGCCGCCAACAGCTTTCTCAGGACAATGGTCAGAAGGCTCATCACCGCCCTGAAGATAGTGGGGGAGGGTATAAAGGACGAAGAGTGGATAGCACAGCTACTCAGCCCCGAGAGCTACAGGGAGAGCATCGAGCCCGCTCCACCCTTCGGGCTGGTGCTGAAAACGATAGCCTACGAGGGGATAGAATGGGAAAATGATGAGTATGCCATCTCGAGGACAAATCGTGCCCTCATGGAGAATCTGGTGATGTTCGGCACGATGGCGAGGGTGATGAGAATCATGCAGGACATGGAGTAA
PROTEIN sequence
Length: 270
MRIALRLAYMGTQCSGFQIQPDVPTVETYLFEALSALGIMDDPKRAAYARASRTDAGVHALGQVVAFNTPHPERALPKAINAYLPPFIWCWARAIVSPEFNPRYDAKERVYEYILYNEGYDIRAIRRACRMLEGEHDFANFASVEDDNGSTIRRINQIKVRLDGEFVHLTIAANSFLRTMVRRLITALKIVGEGIKDEEWIAQLLSPESYRESIEPAPPFGLVLKTIAYEGIEWENDEYAISRTNRALMENLVMFGTMARVMRIMQDME*