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RBG2_9

Alias: scaffold_9

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_9_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..558)
DNA (558bp) protein (186aa)
saccharopine dehydrogenase Tax=RBG_13_Chloroflexi_51_36_curated
saccharopine dehydrogenase
Saccharopine dehydrogenase n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WLS0_9EURY (db=UNIREF evalue=0.0 bit_score=217.6 identity=57.7 coverage=99.4623655913979)
(db=HMMPfam db_id=PF03435 from=3 to=182 evalue=4.0e-22 interpro_id=IPR005097 interpro_description=Saccharopine dehydrogenase / Homospermidine synthase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
RBG2_9_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1144..2721)
DNA (1578bp) protein (526aa)
probable aldehyde dehydrogenase-like Tax=RBG_13_Chloroflexi_51_36_curated
Aldehyde dehydrogenase n=1 Tax=Chlamydomonas reinhardtii RepID=A8J5Z8_CHLRE (db=UNIREF evalue=0.0 bit_score=556.2 identity=55.9 coverage=94.8669201520913)
aldehyde dehydrogenase
aldehyde dehydrogenase
RBG2_9_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

3304..4320
DNA (1017bp) protein (339aa)
Zn-dependent hydrolase Tax=RBG_13_Chloroflexi_51_36_curated
Zn-dependent hydrolase
Zn-dependent hydrolase
Putative Zn-dependent hydrolase n=1 Tax=Desulfosporosinus meridiei DSM 13257 RepID=G6GB31_9FIRM (db=UNIREF evalue=0.0 bit_score=348.6 identity=54.9 coverage=89.6755162241888)
RBG2_9_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

4296..5303
DNA (1008bp) protein (336aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Iron-sulfur cluster binding protein n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O29628_ARCFU (db=UNIREF evalue=0.0 bit_score=273.1 identity=42.1 coverage=98.2142857142857)
coiled-coil (db=Coil db_id=coil from=43 to=64 evalue=NA)
RBG2_9_5
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

5389..6276
DNA (888bp) protein (296aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=RBG_13_Chloroflexi_51_36_curated
Methylthioadenosine phosphorylase n=1 Tax=Terriglobus saanensis SP1PR4 RepID=E8V5L0_TERSS (db=UNIREF evalue=0.0 bit_score=349.4 identity=60.8 coverage=94.9324324324324)
methylthioadenosine phosphorylase
methylthioadenosine phosphorylase
RBG2_9_6
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

6260..7288
DNA (1029bp) protein (343aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K181_DEHLB (db=UNIREF evalue=0.0 bit_score=351.7 identity=49.6 coverage=98.5422740524781)
RBG2_9_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7339..7791)
DNA (453bp) protein (151aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_13_Chloroflexi_51_36_curated
Ribose 5-phosphate isomerase B n=2 Tax=Clostridium butyricum RepID=B1R2I2_CLOBU (db=UNIREF evalue=3.9e-40 bit_score=169.9 identity=57.3 coverage=94.0397350993377)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Sugar-phosphate isomerase, RpiB/LacA/LacB types (db=HMMPIR db_id=PIRSF005384 from=1 to=148 evalue=2.8e-70 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
RBG2_9_8
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7788..8408)
DNA (621bp) protein (207aa)
sua5 superfamily-like protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_13_Chloroflexi_51_36_curated
sua5 superfamily-like protein
Sua5 superfamily-related protein n=1 Tax=Pyrococcus yayanosii CH1 RepID=F8AEG8_PYRYC (db=UNIREF evalue=1.3e-41 bit_score=175.3 identity=47.2 coverage=93.2367149758454)
(db=HMMPfam db_id=PF01300 from=13 to=188 evalue=1.1e-58 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
RBG2_9_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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8599..10263
DNA (1665bp) protein (555aa)
guaA; GMP synthase (glutamine-hydrolysing); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Chloroflexi_51_36_curated
guaA; GMP synthase (glutamine-hydrolysing)
guaA; GMP synthase (glutamine-hydrolysing)
GMP synthase, large subunit n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K041_DEHLB (db=UNIREF evalue=0.0 bit_score=783.1 identity=67.4 coverage=98.5585585585586)
RBG2_9_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

10254..10541
DNA (288bp) protein (96aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Rubrerythrin
Putative uncharacterized protein n=1 Tax=Mahella australiensis 50-1 BON RepID=F4A227_MAHA5 (db=UNIREF evalue=2.5e-08 bit_score=63.5 identity=39.1 coverage=87.5)
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
RBG2_9_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

10991..11170
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
10991..11170 + ( gc_cont=0.494)
RBG2_9_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

11174..12481
DNA (1308bp) protein (436aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RBG_13_Chloroflexi_51_36_curated
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine/glycine ligase n=4 Tax=Dehalococcoides RepID=D3SIS7_DEHSG (db=UNIREF evalue=0.0 bit_score=469.9 identity=54.7 coverage=95.4128440366973)
RBG2_9_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

12588..13046
DNA (459bp) protein (153aa)
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RBG_13_Chloroflexi_51_36_curated
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=5 Tax=Dehalococcoides RepID=A5FR39_DEHSB (db=UNIREF evalue=6.5e-43 bit_score=179.1 identity=58.4 coverage=96.7320261437908)
seg (db=Seg db_id=seg from=116 to=128)
RBG2_9_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

13048..14394
DNA (1347bp) protein (449aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RBG_13_Chloroflexi_51_36_curated
purB; adenylosuccinate lyase (EC:4.3.2.2)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=5 Tax=Dehalococcoides RepID=A5FR26_DEHSB (db=UNIREF evalue=0.0 bit_score=597.4 identity=62.8 coverage=99.109131403118)
RBG2_9_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14454..15905
DNA (1452bp) protein (484aa)
vinylacetyl-CoA Delta-isomerase; K14534 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] Tax=RBG_13_Chloroflexi_51_36_curated
Vinylacetyl-CoA Delta-isomerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9H2_DESAA (db=UNIREF evalue=0.0 bit_score=650.2 identity=65.4 coverage=98.7603305785124)
vinylacetyl-CoA Delta-isomerase
vinylacetyl-CoA Delta-isomerase
RBG2_9_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

16000..16899
DNA (900bp) protein (300aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6) Tax=RBG_13_Chloroflexi_51_36_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z881_DEHE1 (db=UNIREF evalue=0.0 bit_score=334.3 identity=55.3 coverage=97.3333333333333)
RBG2_9_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(16959..17927)
DNA (969bp) protein (323aa)
6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=RBG_13_Chloroflexi_51_36_curated
6-phosphofructokinase
6-phosphofructokinase
6-phosphofructokinase 2 n=1 Tax=Meiothermus silvanus DSM 9946 RepID=D7BE75_MEISD (db=UNIREF evalue=0.0 bit_score=385.6 identity=63.2 coverage=99.0712074303406)
RBG2_9_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(17959..18492)
DNA (534bp) protein (178aa)
seg 162..173 Tax=RBG_13_Chloroflexi_51_36_curated
seg (db=Seg db_id=seg from=162 to=173)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=19 to=85 evalue=2.3e-07 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
RBG2_9_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

19250..20965
DNA (1716bp) protein (572aa)
transmembrane_regions 12..34 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=32 evalue=5.0)
RBG2_9_20
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(21511..22644)
DNA (1134bp) protein (378aa)
seg 14..26 Tax=RBG_13_Chloroflexi_51_36_curated
seg (db=Seg db_id=seg from=14 to=26)
seg (db=Seg db_id=seg from=271 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
RBG2_9_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(22715..23845)
DNA (1131bp) protein (377aa)
seg 10..19 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=204 to=219)
seg (db=Seg db_id=seg from=44 to=55)
RBG2_9_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(24053..25024)
DNA (972bp) protein (324aa)
carbamate kinase (EC:2.7.2.2); K00926 carbamate kinase [EC:2.7.2.2] Tax=RBG_13_Chloroflexi_51_36_curated
carbamate kinase (EC:2.7.2.2)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFC2_ACIB4 (db=UNIREF evalue=0.0 bit_score=313.5 identity=50.6 coverage=93.5185185185185)
RBG2_9_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(25021..26439)
DNA (1419bp) protein (473aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
putative GTPase
putative GTPase
GTPase family protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DWG4_9BACL (db=UNIREF evalue=0.0 bit_score=592.4 identity=61.7 coverage=93.8689217758985)
RBG2_9_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

26901..27440
DNA (540bp) protein (180aa)
N-acetyltransferase GCN5 Tax=RBG_13_Chloroflexi_51_36_curated
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZC1_THEOJ (db=UNIREF evalue=3.8e-34 bit_score=150.2 identity=42.3 coverage=97.2222222222222)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=173 evalue=4.1e-43 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
RBG2_9_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(27837..28259)
DNA (423bp) protein (141aa)
Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain 12..93 Tax=RBG_13_Chloroflexi_51_36_curated
(db=HMMPfam db_id=PF01243 from=12 to=93 evalue=1.1e-12 interpro_id=IPR011576 interpro_description=Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO=Molecular Function: pyridoxamine-phosphate oxidase activity (GO:0004733), Molecular Function: FMN binding (GO:0010181), Biological Process: oxidation-reduction process (GO:0055114))
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=4 to=134 evalue=2.9e-20 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
RBG2_9_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

28537..29022
DNA (486bp) protein (162aa)
source missing description 6..135 Tax=RBG_13_Chloroflexi_51_36_curated
(db=HMMPfam db_id=PF02752 from=6 to=135 evalue=1.6e-05 interpro_id=IPR011022 interpro_description=Arrestin C-terminal-like domain)
E set domains (db=superfamily db_id=SSF81296 from=6 to=161 evalue=2.1e-07 interpro_id=IPR014756 interpro_description=Immunoglobulin E-set)
RBG2_9_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(29192..30298)
DNA (1107bp) protein (369aa)
chromosome condensation regulator RCC1 Tax=RBG_13_Chloroflexi_51_36_curated
Beta-lactamase inhibitory protein II n=1 Tax=Paenibacillus sp. Y412MC10 RepID=D3EIJ5_GEOS4 (db=UNIREF evalue=0.0 bit_score=308.5 identity=56.7 coverage=70.189701897019)
chromosome condensation regulator RCC1
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
RBG2_9_28
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(31026..33737)
DNA (2712bp) protein (904aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
hypothetical protein
Restriction endonuclease n=9 Tax=Acinetobacter baumannii RepID=F5IQI6_ACIBA (db=UNIREF evalue=0.0 bit_score=410.6 identity=28.2 coverage=97.787610619469)
RBG2_9_29
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(34121..34903)
DNA (783bp) protein (261aa)
ABC-type cobalamin/Fe3+-siderophores transport system, ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RBG_13_Chloroflexi_51_36_curated
iron ABC transporter
ABC transporter related protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K094_DEHLB (db=UNIREF evalue=0.0 bit_score=274.2 identity=52.6 coverage=94.2528735632184)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=138 to=152 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
RBG2_9_30
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(34916..36028)
DNA (1113bp) protein (371aa)
transporter permease; K02015 iron complex transport system permease protein Tax=RBG_13_Chloroflexi_51_36_curated
transporter permease
transporter permease
Transport system permease protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K095_DEHLB (db=UNIREF evalue=0.0 bit_score=414.8 identity=57.6 coverage=94.6091644204852)
Displaying items 1-30 of 82 in total

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