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RBG2_10

Alias: scaffold_10

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_10_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..458)
DNA (456bp) protein (152aa)
2-nitropropane dioxygenase (EC:1.13.11.32); K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RBG_13_Chloroflexi_51_36_curated
2-nitropropane dioxygenase (EC:1.13.11.32)
2-nitropropane dioxygenase n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3P994_DEFDS (db=UNIREF evalue=0.0 bit_score=221.5 identity=67.8 coverage=99.3421052631579)
Inosine monophosphate dehydrogenase (IMPDH) (db=superfamily db_id=SSF51412 from=2 to=152 evalue=8.5e-33)
RBG2_10_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(629..1426)
DNA (798bp) protein (266aa)
enoyl-CoA hydratase/isomerase Tax=RBG_13_Chloroflexi_51_36_curated
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q131V1_RHOPS (db=UNIREF evalue=0.0 bit_score=203.0 identity=42.3 coverage=97.7443609022556)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=1 to=265 evalue=1.0e-81)
RBG2_10_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1536..3260)
DNA (1725bp) protein (575aa)
DNA polymerase IV; K02347 DNA polymerase (family X) Tax=RBG_13_Chloroflexi_51_36_curated
DNA polymerase IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWZ5_SYNAS (db=UNIREF evalue=0.0 bit_score=761.1 identity=65.6 coverage=99.304347826087)
DNA polymerase IV
DNA polymerase IV
RBG2_10_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(3627..5189)
DNA (1563bp) protein (521aa)
poly(3-hydroxybutyrate) depolymerase Tax=RBG_13_Chloroflexi_51_36_curated
poly(3-hydroxybutyrate) depolymerase
Phospholipase/Carboxylesterase n=1 Tax=Aciduliprofundum boonei T469 RepID=B5ID27_ACIB4 (db=UNIREF evalue=1.2e-35 bit_score=156.8 identity=33.7 coverage=53.9347408829175)
seg (db=Seg db_id=seg from=231 to=239)
RBG2_10_5
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

5351..5539
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
5351..5539 + ( gc_cont=0.455)
RBG2_10_6
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

5602..6225
DNA (624bp) protein (208aa)
abortive infection protein Tax=RBG_13_Chloroflexi_51_36_curated
abortive infection protein
Abortive infection protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UZP8_ROSS1 (db=UNIREF evalue=1.5e-29 bit_score=135.2 identity=36.6 coverage=95.1923076923077)
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=205)
RBG2_10_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

6388..7023
DNA (636bp) protein (212aa)
abortive infection protein Tax=RBG_13_Chloroflexi_51_36_curated
abortive infection protein
Abortive infection protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UZP8_ROSS1 (db=UNIREF evalue=3.7e-28 bit_score=130.6 identity=37.2 coverage=83.9622641509434)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=144)
RBG2_10_8
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7051..7821)
DNA (771bp) protein (257aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Conserved hypothetical membrane protein n=2 Tax=uncultured archaeon RepID=Q2Y4H0_9ARCH (db=UNIREF evalue=0.0 bit_score=193.4 identity=41.2 coverage=89.4941634241245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250)
RBG2_10_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

8225..8797
DNA (573bp) protein (191aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative uncharacterized protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LDW2_9BACT (db=UNIREF evalue=2.1e-22 bit_score=111.3 identity=34.2 coverage=94.2408376963351)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
RBG2_10_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

8808..9416
DNA (609bp) protein (203aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PTK8_9BACT (db=UNIREF evalue=9.2e-21 bit_score=105.9 identity=33.3 coverage=89.1625615763547)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
RBG2_10_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

9442..12171
DNA (2730bp) protein (910aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_13_Chloroflexi_51_36_curated
DNA polymerase I n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3A7_DEHLB (db=UNIREF evalue=0.0 bit_score=919.1 identity=51.4 coverage=99.1208791208791)
DNA polymerase I
DNA polymerase I
RBG2_10_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

12232..12588
DNA (357bp) protein (119aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I7A3_9FIRM (db=UNIREF evalue=2.4e-21 bit_score=107.1 identity=50.5 coverage=77.3109243697479)
RBG2_10_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

12632..13312
DNA (681bp) protein (227aa)
isf-8; iron-sulfur flavoprotein Tax=RBG_13_Chloroflexi_51_36_curated
Iron-sulfur flavoprotein n=1 Tax=Methanosarcina acetivorans C2A RepID=Q8TPS0_METAC (db=UNIREF evalue=0.0 bit_score=198.0 identity=45.7 coverage=96.0352422907489)
isf-8; iron-sulfur flavoprotein
no description (db=Gene3D db_id=G3DSA:3.40.50.360 from=2 to=194 evalue=1.9e-18)
RBG2_10_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

13410..14237
DNA (828bp) protein (276aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RBG_13_Chloroflexi_51_36_curated
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3A9_DEHLB (db=UNIREF evalue=0.0 bit_score=261.5 identity=50.9 coverage=96.3768115942029)
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=243 to=267 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
RBG2_10_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14329..14577
DNA (249bp) protein (83aa)
beta-lactamase Tax=RBG_13_Chloroflexi_51_36_curated
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG80_9CHLR (db=UNIREF evalue=1.4e-12 bit_score=77.4 identity=52.2 coverage=79.5180722891566)
beta-lactamase
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=76 evalue=2.1e-14)
RBG2_10_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14574..15131
DNA (558bp) protein (186aa)
hydrolase Tax=RBG_13_Chloroflexi_51_36_curated
Alpha/beta hydrolase fold protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG80_9CHLR (db=UNIREF evalue=5.7e-25 bit_score=119.8 identity=39.7 coverage=94.6236559139785)
hydrolase
ALPHA/BETA HYDROLASE RELATED (db=HMMPanther db_id=PTHR10992 from=4 to=182 evalue=1.8e-18)
RBG2_10_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

15376..16641
DNA (1266bp) protein (422aa)
seg 40..56 Tax=RBG_13_Chloroflexi_51_36_curated
seg (db=Seg db_id=seg from=40 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
RBG2_10_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(17134..18852)
DNA (1719bp) protein (573aa)
acd9; hypothetical protein (EC:1.3.99.-); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RBG_13_Chloroflexi_51_36_curated
Acyl-CoA dehydrogenase domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ79_9FIRM (db=UNIREF evalue=0.0 bit_score=690.3 identity=60.1 coverage=97.9057591623037)
acd9; hypothetical protein (EC:1.3.99.-)
acd9; hypothetical protein (EC:1.3.99.-)
RBG2_10_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

19181..19627
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGK9_DESAA (db=UNIREF evalue=9.5e-23 bit_score=112.1 identity=44.2 coverage=96.6442953020134)
hypothetical protein
seg (db=Seg db_id=seg from=32 to=39)
RBG2_10_20
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(19795..20748)
DNA (954bp) protein (318aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
19795..20748 - ( gc_cont=0.405)
RBG2_10_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(20764..21798)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVP2_NOSP7 (db=UNIREF evalue=7.3e-26 bit_score=123.6 identity=27.2 coverage=89.5652173913044)
DGQHR: DGQHR domain (db=HMMTigr db_id=TIGR03187 from=9 to=282 evalue=4.1e-31 interpro_id=IPR017601 interpro_description=DGQHR-containing domain)
RBG2_10_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(21955..22803)
DNA (849bp) protein (283aa)
Dam; site-specific DNA methylase; K06223 DNA adenine methylase [EC:2.1.1.72] Tax=RBG_13_Chloroflexi_51_36_curated
DNA adenine methylase (EC:2.1.1.72)
Site-specific DNA methylase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0W3_PELTS (db=UNIREF evalue=0.0 bit_score=251.9 identity=48.5 coverage=92.9328621908127)
N6_MTASE (db=PatternScan db_id=PS00092 from=187 to=193 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
RBG2_10_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(23117..23344)
DNA (228bp) protein (76aa)
seg 6..23 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
RBG2_10_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(23571..23822)
DNA (252bp) protein (84aa)
transmembrane_regions 24..46 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
RBG2_10_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(23905..24519)
DNA (615bp) protein (205aa)
methylase Tax=RBG_13_Chloroflexi_51_36_curated
methylase
Methyltransferase n=1 Tax=Sulfolobus acidocaldarius DSM 639 RepID=Q4J808_SULAC (db=UNIREF evalue=5.5e-21 bit_score=106.7 identity=45.1 coverage=62.4390243902439)
(db=HMMPfam db_id=PF08241 from=61 to=160 evalue=1.4e-15 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
RBG2_10_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(24640..25680)
DNA (1041bp) protein (347aa)
o-methyltransferase Tax=RBG_13_Chloroflexi_51_36_curated
O-methyltransferase involved in albicidin biosynthesis protein n=1 Tax=Verrucosispora maris AB-18-032 RepID=F4FBQ8_VERMA (db=UNIREF evalue=4.0e-24 bit_score=117.9 identity=28.9 coverage=86.4553314121037)
o-methyltransferase
seg (db=Seg db_id=seg from=9 to=14)
RBG2_10_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

25783..26067
DNA (285bp) protein (95aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
25783..26067 + ( gc_cont=0.474)
RBG2_10_28
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(25957..27042)
DNA (1086bp) protein (362aa)
S-layer protein Tax=RBG_13_Chloroflexi_51_36_curated
S-layer domain-containing protein n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DRV7_DESRL (db=UNIREF evalue=0.0 bit_score=233.0 identity=39.0 coverage=94.7513812154696)
S-layer protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
RBG2_10_29
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

27536..27862
DNA (327bp) protein (109aa)
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein Tax=RBG_13_Chloroflexi_51_36_curated
short-chain dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A748_9PROT (db=UNIREF evalue=3.0e-18 bit_score=96.7 identity=53.3 coverage=82.5688073394495)
seg (db=Seg db_id=seg from=10 to=23)
RBG2_10_30
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

27932..28318
DNA (387bp) protein (129aa)
short-chain dehydrogenase/reductase SDR Tax=RBG_13_Chloroflexi_51_36_curated
short-chain dehydrogenase/reductase SDR
Oxidoreductase, short chain dehydrogenase/reductase family n=4 Tax=Burkholderia RepID=B9B7S3_9BURK (db=UNIREF evalue=3.2e-27 bit_score=126.7 identity=50.8 coverage=95.3488372093023)
(db=HMMPfam db_id=PF00106 from=5 to=45 evalue=0.00012 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
Displaying items 1-30 of 73 in total

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