Alias: scaffold_12
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RBG2_12_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
1..216
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flavodoxin/nitric oxide synthase Tax=RBG_13_Chloroflexi_51_36_curated
flavodoxin/nitric oxide synthase
Flavodoxin/nitric oxide synthase n=4 Tax=Dehalococcoides RepID=A5FPK0_DEHSB (db=UNIREF evalue=1.7e-14 bit_score=83.6 identity=59.7 coverage=91.6666666666667)
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RBG2_12_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
427..636
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2-oxoisovalerate dehydrogenase E1 Tax=RBG_13_Chloroflexi_51_36_curated
2-oxoisovalerate dehydrogenase E1
2-oxoisovalerate dehydrogenase, E1 component beta subunit n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CNE3_DESK7 (db=UNIREF evalue=1.3e-19 bit_score=100.5 identity=66.7 coverage=97.1428571428571)
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RBG2_12_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
633..878
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hypothetical protein; K07339 hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
YcfA family protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3J3_DEHLB (db=UNIREF evalue=2.9e-21 bit_score=106.3 identity=61.2 coverage=96.3414634146341)
YcfA/nrd intein domain (db=superfamily db_id=SSF54786 from=7 to=78 evalue=1.1e-07 interpro_id=IPR015146 interpro_description=Ribonucleotide reductase, stirrup GO=Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
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RBG2_12_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
1040..1672
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peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RBG_13_Chloroflexi_51_36_curated
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Chloroflexus RepID=B8G789_CHLAD (db=UNIREF evalue=0.0 bit_score=204.1 identity=59.2 coverage=72.9857819905213)
peptidyl-prolyl isomerase (EC:5.2.1.8)
seg (db=Seg db_id=seg from=30 to=47)
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RBG2_12_5
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(1723..2547)
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pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RBG_13_Chloroflexi_51_36_curated
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUI8_OPITP (db=UNIREF evalue=0.0 bit_score=234.2 identity=49.0 coverage=84.0)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=11 to=208 evalue=1.6e-57)
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RBG2_12_6
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(2544..4256)
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pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RBG_13_Chloroflexi_51_36_curated
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Oceanithermus profundus DSM 14977 RepID=E4U8K2_OCEP5 (db=UNIREF evalue=0.0 bit_score=364.0 identity=38.6 coverage=99.4746059544658)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
coiled-coil (db=Coil db_id=coil from=228 to=249 evalue=NA)
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RBG2_12_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(4358..5206)
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endonuclease IV (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=RBG_13_Chloroflexi_51_36_curated
Endonuclease IV (EC:3.1.21.2)
Endonuclease IV (EC:3.1.21.2)
Putative endonuclease IV n=1 Tax=Methanosarcina mazei Go1 RepID=Q8PZN2_METMA (db=UNIREF evalue=0.0 bit_score=301.6 identity=57.5 coverage=95.7597173144876)
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RBG2_12_8
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
5311..5529
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NIZ4_DESAR (db=UNIREF evalue=2.2e-25 bit_score=119.8 identity=75.0 coverage=97.2602739726027)
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RBG2_12_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(5735..6613)
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ilvE1; branched-chain amino acid aminotransferase (EC:2.6.1.42) Tax=RBG_13_Chloroflexi_51_36_curated
Aminodeoxychorismate lyase (EC:4.1.3.38)
Branched-chain amino acid aminotransferase n=1 Tax=Desulfosporosinus sp. OT RepID=G2G2N7_9FIRM (db=UNIREF evalue=0.0 bit_score=228.0 identity=43.2 coverage=95.221843003413)
AA_TRANSFER_CLASS_4 (db=PatternScan db_id=PS00770 from=188 to=217 evalue=0.0 interpro_id=IPR018300 interpro_description=Aminotransferase, class IV, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
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RBG2_12_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(6789..7388)
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trpG; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II (EC:2.6.1.85); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RBG_13_Chloroflexi_51_36_curated
Para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABR9_CARHZ (db=UNIREF evalue=0.0 bit_score=265.4 identity=66.3 coverage=92.5)
trpG; para-aminobenzoate/anthranilate synthase glutamine amidotransferase, component II (EC:2.6.1.85)
GATASE (db=FPrintScan db_id=PR00096 from=47 to=56 evalue=1.6e-13)
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RBG2_12_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
7569..9086
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2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_13_Chloroflexi_51_36_curated
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=5 Tax=Dehalococcoides RepID=A5FR43_DEHSB (db=UNIREF evalue=0.0 bit_score=749.2 identity=72.5 coverage=99.0118577075099)
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RBG2_12_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
9157..9570
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MgtC / SapB family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=RBG_13_Chloroflexi_51_36_curated
magnesium transporter MgtC
MgtC/SapB transporter n=5 Tax=Dehalococcoides RepID=A5FR42_DEHSB (db=UNIREF evalue=1.9e-33 bit_score=147.5 identity=59.2 coverage=91.304347826087)
seg (db=Seg db_id=seg from=14 to=24)
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RBG2_12_13 |
Not on your lists |
9658..10785
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Marine sediment metagenome DNA, contig: S01H1_S23186 {ECO:0000313|EMBL:GAG17222.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sbcD; DNA repair exonuclease SbcCD, D subunit
Metallophosphoesterase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39WB4_GEOMG (db=UNIREF evalue=1.8e-33 bit_score=149.1 identity=31.8 coverage=94.9468085106383)
seg (db=Seg db_id=seg from=340 to=357)
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RBG2_12_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
10785..12929
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
DNA repair exonuclease SbcCD, C subunit, putative n=2 Tax=Geobacter sulfurreducens RepID=D7AIK8_GEOSK (db=UNIREF evalue=1.6e-35 bit_score=156.8 identity=25.8 coverage=97.2027972027972)
coiled-coil (db=Coil db_id=coil from=540 to=561 evalue=NA)
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RBG2_12_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
13054..13677
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6-O-methylguanine-DNA methyltransferase Tax=RBG_13_Chloroflexi_51_36_curated
6-O-methylguanine-DNA methyltransferase
6-o-methylguanine DNA methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRJ6_SYNAS (db=UNIREF evalue=1.2e-34 bit_score=152.1 identity=45.8 coverage=84.6153846153846)
seg (db=Seg db_id=seg from=149 to=159)
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RBG2_12_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
13674..13979
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transmembrane_regions 21..43 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
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RBG2_12_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
13996..14616
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=G9XWR7_DESHA (db=UNIREF evalue=8.5e-14 bit_score=82.8 identity=41.8 coverage=37.6811594202899)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=122 evalue=1.4e-21)
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RBG2_12_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
14836..15924
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leuB; 3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=RBG_13_Chloroflexi_51_36_curated
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=5 Tax=Dehalococcoides RepID=LEU3_DEHSC (db=UNIREF evalue=0.0 bit_score=473.8 identity=64.5 coverage=98.8980716253444)
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RBG2_12_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
15935..17530
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alpha-isopropylmalate/homocitrate synthase transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_13_Chloroflexi_51_36_curated
alpha-isopropylmalate/homocitrate synthase family transferase
alpha-isopropylmalate/homocitrate synthase family transferase
2-isopropylmalate synthase n=5 Tax=Dehalococcoides RepID=A5FR51_DEHSB (db=UNIREF evalue=0.0 bit_score=669.1 identity=62.6 coverage=97.9323308270677)
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RBG2_12_20
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
17719..18381
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methyltransferase type 11 Tax=RBG_13_Chloroflexi_51_36_curated
methyltransferase type 11
Methyltransferase type 11 n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSQ7_METMJ (db=UNIREF evalue=0.0 bit_score=256.9 identity=56.7 coverage=97.737556561086)
(db=HMMPfam db_id=PF08241 from=51 to=150 evalue=1.7e-20 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
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RBG2_12_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
18512..19039
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos9D1 RepID=Q647W8_9ARCH (db=UNIREF evalue=0.0 bit_score=230.7 identity=68.7 coverage=92.0454545454545)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=23 to=156 evalue=1.3e-27)
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RBG2_12_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(19104..19883)
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prolyl oligopeptidase family protein Tax=RBG_13_Chloroflexi_51_36_curated
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (TodF) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGI4_9FIRM (db=UNIREF evalue=0.0 bit_score=226.9 identity=46.1 coverage=91.9230769230769)
prolyl oligopeptidase family protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=11 to=248 evalue=1.9e-42)
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RBG2_12_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(19895..20491)
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rhomboid family protein Tax=RBG_13_Chloroflexi_51_36_curated
Rhomboid family protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1X2_DEHLB (db=UNIREF evalue=3.2e-42 bit_score=177.2 identity=46.1 coverage=91.4572864321608)
rhomboid family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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RBG2_12_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
20625..23015
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oligosaccharyl transferase subunit STT3; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=RBG_13_Chloroflexi_51_36_curated
Oligosaccharyl transferase, putative n=1 Tax=uncultured archaeon RepID=Q2Y4I1_9ARCH (db=UNIREF evalue=0.0 bit_score=478.0 identity=36.1 coverage=94.3538268506901)
oligosaccharyl transferase subunit STT3
oligosaccharyl transferase subunit STT3
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RBG2_12_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
23284..24351
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glucose-1-phosphate thymidyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Chloroflexi_51_36_curated
Glucose-1-phosphate thymidyltransferase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CQK6_DESK7 (db=UNIREF evalue=0.0 bit_score=458.4 identity=62.9 coverage=98.876404494382)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidyltransferase (EC:2.7.7.24)
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RBG2_12_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
24400..24786
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
S23 ribosomal protein n=1 Tax=Lyngbya majuscula 3L RepID=F4XK69_9CYAN (db=UNIREF evalue=1.7e-28 bit_score=131.0 identity=57.8 coverage=83.7209302325581)
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RBG2_12_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
24813..25382
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rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_13_Chloroflexi_51_36_curated
putative dTDP-4-deoxyrhamnose 3,5 epimerase
RfbC dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A0B3_THESM (db=UNIREF evalue=0.0 bit_score=253.4 identity=65.7 coverage=93.1578947368421)
DTDP-6-DEOXY-D-GLUCOSE-3,5 EPIMERASE (db=HMMPanther db_id=PTHR21047 from=1 to=187 evalue=1.7e-66 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase-related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
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RBG2_12_28
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
25379..26428
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dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_13_Chloroflexi_51_36_curated
dTDP-glucose 4,6-dehydratase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CQK9_DESK7 (db=UNIREF evalue=0.0 bit_score=458.0 identity=61.8 coverage=98.5714285714286)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
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RBG2_12_29
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
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Not on your lists |
26425..27294
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dTDP 4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RBG_13_Chloroflexi_51_36_curated
dTDP 4-dehydrorhamnose reductase
dTDP 4-dehydrorhamnose reductase n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A0B4_THESM (db=UNIREF evalue=0.0 bit_score=283.5 identity=49.0 coverage=98.6206896551724)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=215 evalue=1.6e-56 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
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RBG2_12_30
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria
|
Not on your lists |
comp(27505..27921)
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hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
seg (db=Seg db_id=seg from=25 to=39)
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