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RBG2_13

Alias: scaffold_14

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_13_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
1..321 - ( gc_cont=0.495)
RBG2_13_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(666..1946)
DNA (1281bp) protein (427aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_13_Chloroflexi_51_36_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WP99_BACT2 (db=UNIREF evalue=0.0 bit_score=413.3 identity=51.9 coverage=94.3793911007026)
3-oxoacyl-(acyl-carrier-protein) synthase 2
seg (db=Seg db_id=seg from=280 to=295)
RBG2_13_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1946..2728)
DNA (783bp) protein (261aa)
short-chain dehydrogenase/reductase SDR; K10780 enoyl-[acyl carrier protein] reductase III [EC:1.3.1.-] Tax=RBG_13_Chloroflexi_51_36_curated
short-chain dehydrogenase/reductase SDR
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WTM5_BACT2 (db=UNIREF evalue=0.0 bit_score=285.8 identity=59.5 coverage=93.4865900383142)
no description (db=HMMSmart db_id=SM00822 from=6 to=185 evalue=0.0036 interpro_id=IPR020842 interpro_description=Polyketide synthase/Fatty acid synthase, KR)
RBG2_13_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(2731..2976)
DNA (246bp) protein (82aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=RBG_13_Chloroflexi_51_36_curated
acpP; acyl carrier protein
Acyl carrier protein n=3 Tax=Aquificaceae RepID=ACP_AQUAE (db=UNIREF evalue=1.7e-13 bit_score=80.5 identity=51.9 coverage=91.4634146341463)
ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED (db=HMMPanther db_id=PTHR20863 from=3 to=79 evalue=1.3e-14)
RBG2_13_5
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(2973..4007)
DNA (1035bp) protein (345aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_13_Chloroflexi_51_36_curated
Phosphate acyltransferase n=1 Tax=Thermincola potens JR RepID=D5X8P7_THEPJ (db=UNIREF evalue=0.0 bit_score=270.0 identity=44.5 coverage=93.3333333333333)
fatty acid/phospholipid synthesis protein PlsX
seg (db=Seg db_id=seg from=107 to=119)
RBG2_13_6
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(4012..4434)
DNA (423bp) protein (141aa)
acyl dehydratase MaoC Tax=RBG_13_Chloroflexi_51_36_curated
acyl dehydratase MaoC
MaoC domain protein dehydratase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CP33_DESK7 (db=UNIREF evalue=2.4e-28 bit_score=130.6 identity=47.7 coverage=89.3617021276596)
(db=HMMPfam db_id=PF01575 from=14 to=107 evalue=1.5e-24 interpro_id=IPR002539 interpro_description=MaoC-like dehydratase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
RBG2_13_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(4442..4837)
DNA (396bp) protein (132aa)
Thioesterase/thiol ester dehydrase-isomerase 8..130 Tax=RBG_13_Chloroflexi_51_36_curated
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=8 to=130 evalue=1.6e-12)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=5 to=130 evalue=5.1e-08)
RBG2_13_8
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(5351..5788)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BFH0_9BACT (db=UNIREF evalue=4.3e-28 bit_score=129.8 identity=51.4 coverage=72.6027397260274)
hypothetical protein
seg (db=Seg db_id=seg from=129 to=144)
RBG2_13_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(5963..6517)
DNA (555bp) protein (185aa)
acetyltransferase Tax=RBG_13_Chloroflexi_51_36_curated
Acetyltransferase n=5 Tax=Vibrionales RepID=A3XU16_9VIBR (db=UNIREF evalue=1.1e-23 bit_score=115.5 identity=40.0 coverage=74.5945945945946)
acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=27 to=173 evalue=3.1e-20 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
RBG2_13_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(6545..6862)
DNA (318bp) protein (106aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG84_9FIRM (db=UNIREF evalue=3.0e-15 bit_score=86.7 identity=47.0 coverage=75.4716981132076)
hypothetical protein
RBG2_13_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7062..7880)
DNA (819bp) protein (273aa)
seg 9..14 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=249)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=193)
RBG2_13_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8092..8547)
DNA (456bp) protein (152aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QXV1_PIRSD (db=UNIREF evalue=7.2e-18 bit_score=95.9 identity=41.9 coverage=72.3684210526316)
RBG2_13_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8707..9057)
DNA (351bp) protein (117aa)
seg 6..17 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
RBG2_13_14
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(9107..9337)
DNA (231bp) protein (77aa)
seg 3..21 Tax=RBG_13_Chloroflexi_50_10_curated
seg (db=Seg db_id=seg from=3 to=21)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=5.0)
RBG2_13_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(9421..10893)
DNA (1473bp) protein (491aa)
putative metallopeptidase Tax=RBG_13_Chloroflexi_51_36_curated
putative metallopeptidase
putative metallopeptidase
Type I secretion target GGXGXDXXX repeat protein domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WFY6_9SYNE (db=UNIREF evalue=0.0 bit_score=327.4 identity=40.6 coverage=91.4460285132383)
RBG2_13_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11051..11419)
DNA (369bp) protein (123aa)
seg 6..16 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
RBG2_13_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11466..12185)
DNA (720bp) protein (240aa)
seg 4..21 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=197 to=213)
seg (db=Seg db_id=seg from=31 to=49)
RBG2_13_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(12203..12595)
DNA (393bp) protein (131aa)
coiled-coil 4..25 Tax=RBG_13_Chloroflexi_51_36_curated
coiled-coil (db=Coil db_id=coil from=4 to=25 evalue=NA)
seg (db=Seg db_id=seg from=96 to=125)
(db=HMMPfam db_id=PF01844 from=35 to=81 evalue=1.6e-09 interpro_id=IPR002711 interpro_description=HNH endonuclease GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: endonuclease activity (GO:0004519))
RBG2_13_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(12621..12809)
DNA (189bp) protein (63aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
12621..12809 - ( gc_cont=0.434)
RBG2_13_20
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(12857..13276)
DNA (420bp) protein (140aa)
seg 116..139 Tax=RBG_13_Chloroflexi_51_36_curated
seg (db=Seg db_id=seg from=116 to=139)
RBG2_13_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

13343..14299
DNA (957bp) protein (319aa)
seg 45..62 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=312)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
RBG2_13_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14509..15312
DNA (804bp) protein (268aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacteriovorax marinus SJ RepID=E1WXY0_BACMS (db=UNIREF evalue=2.6e-31 bit_score=141.4 identity=37.1 coverage=71.2686567164179)
RBG2_13_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(15413..15823)
DNA (411bp) protein (137aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RBG_13_Chloroflexi_51_36_curated
B12 binding domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F865_9DELT (db=UNIREF evalue=0.0 bit_score=203.4 identity=72.3 coverage=94.1605839416058)
cobalamin B12-binding domain-containing protein
METHYLMALONYL-COA MUTASE (db=HMMPanther db_id=PTHR23408 from=1 to=133 evalue=1.7e-58)
RBG2_13_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(15911..17590)
DNA (1680bp) protein (560aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RBG_13_Chloroflexi_51_36_curated
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5E0_DESRM (db=UNIREF evalue=0.0 bit_score=822.8 identity=70.2 coverage=99.6428571428571)
RBG2_13_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(17603..18745)
DNA (1143bp) protein (381aa)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2) Tax=RBG_13_Chloroflexi_51_36_curated
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
bcd2; butyryl-CoA dehydrogenase (EC:1.3.99.2)
Butyryl-CoA dehydrogenase n=2 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ACF1_CARHZ (db=UNIREF evalue=0.0 bit_score=415.6 identity=54.7 coverage=98.6876640419948)
RBG2_13_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

19464..21566
DNA (2103bp) protein (701aa)
vpp2; V-type H(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RBG_13_Chloroflexi_51_36_curated
vpp2; V-type H(+)-translocating pyrophosphatase
vpp2; V-type H(+)-translocating pyrophosphatase
Putative K(+)-stimulated pyrophosphate-energized sodium pump 2 n=5 Tax=Dehalococcoides RepID=A5FR76_DEHSB (db=UNIREF evalue=0.0 bit_score=848.2 identity=61.0 coverage=96.4336661911555)
RBG2_13_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(21653..22006)
DNA (354bp) protein (118aa)
transmembrane_regions 4..21 Tax=RBG_13_Chloroflexi_51_36_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
RBG2_13_28
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(22107..22541)
DNA (435bp) protein (145aa)
seg 90..104 Tax=RBG_13_Chloroflexi_51_36_curated
seg (db=Seg db_id=seg from=90 to=104)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
RBG2_13_29
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

22683..25538
DNA (2856bp) protein (952aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RBG_13_Chloroflexi_51_36_curated
excinuclease ABC subunit A
excinuclease ABC subunit A
Excinuclease ABC, A subunit n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0H1_DEHLB (db=UNIREF evalue=0.0 bit_score=1304.7 identity=67.8 coverage=98.6344537815126)
RBG2_13_30
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

25535..26095
DNA (561bp) protein (187aa)
HDIG domain-containing protein Tax=RBG_13_Chloroflexi_51_36_curated
phosphohydrolase
HDIG domain protein n=2 Tax=Dehalococcoides RepID=Q3Z908_DEHE1 (db=UNIREF evalue=0.0 bit_score=209.9 identity=56.3 coverage=96.7914438502674)
no description (db=HMMSmart db_id=SM00471 from=19 to=127 evalue=0.0032 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
Displaying items 1-30 of 45 in total

View Taxonomy