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RBG2_15

Alias: scaffold_16

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_15_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..708)
DNA (708bp) protein (236aa)
RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=CG_Delta_05
rRNA methylase, putative, group 3 n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8M394_9CLOT (db=UNIREF evalue=0.0 bit_score=253.1 identity=53.2 coverage=98.728813559322)
rRNA methylase, putative, group 3
L30e-like (db=superfamily db_id=SSF55315 from=1 to=77 evalue=1.9e-14)
RBG2_15_2
GWA2_OP11_35_8_partial, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(836..1189)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=GWA2_OP11_35_8_partial
coiled-coil (db=Coil db_id=coil from=68 to=89 evalue=NA)
seg (db=Seg db_id=seg from=7 to=20)
RBG2_15_3
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(1464..2006)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_10_curated
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1P3_DEHLB (db=UNIREF evalue=0.0 bit_score=215.3 identity=56.2 coverage=97.7900552486188)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=179 evalue=1.2e-05)
RBG2_15_4
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2014..2574)
DNA (561bp) protein (187aa)
Tax=BJP_08E140C01_Falkowbacteria_33_19
Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWF2_9CLOT (db=UNIREF evalue=1.5e-30 bit_score=138.3 identity=50.7 coverage=71.6577540106952)
zinc-binding CMP/dCMP deaminase
seg (db=Seg db_id=seg from=164 to=175)
RBG2_15_5
RBG2, RBG2, RBG2, RBG2, Chloroflexi, Bacteria

Not on your lists

comp(2728..2982)
DNA (255bp) protein (85aa)
DnaJ/Hsp40 cysteine-rich domain (db=superfamily db_id=SSF57938 from=44 to=75 evalue=0.0006 interpro_id=IPR001305 interpro_description=Heat shock protein DnaJ, cysteine-rich domain GO=Molecular Function: heat shock protein binding (GO:0031072), Molecular Function: unfolded protein binding (GO:0051082))
RBG2_15_6
RBG2, RBG2, RBG2, RBG2, Chloroflexi, Bacteria

Not on your lists

comp(3146..3367)
DNA (222bp) protein (74aa)
3146..3367 - ( gc_cont=0.486)
RBG2_15_7
RBG2, RBG2, RBG2, RBG2, Chloroflexi, Bacteria

Not on your lists

comp(3698..4093)
DNA (396bp) protein (132aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
RBG2_15_8
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(4440..4889)
DNA (450bp) protein (150aa)
hypothetical protein Tax=RBG_13_Chloroflexi_53_26_curated
Bile acid 7-alpha dehydratase
Putative dehydratase n=1 Tax=Frankia sp. CN3 RepID=G6H9Z2_9ACTO (db=UNIREF evalue=1.3e-19 bit_score=101.7 identity=39.2 coverage=83.3333333333333)
NTF2-like (db=superfamily db_id=SSF54427 from=10 to=146 evalue=1.2e-28)
RBG2_15_9
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5320..6198
DNA (879bp) protein (293aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:KKH95085.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp.
putative hydrolase
putative hydrolase
Putative uncharacterized protein n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q469E9_METBF (db=UNIREF evalue=0.0 bit_score=328.2 identity=57.9 coverage=88.0546075085324)
RBG2_15_10
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

6268..6669
DNA (402bp) protein (134aa)
phenylacetic acid degradation-related protein Tax=RBG_13_Chloroflexi_53_26_curated
Phenylacetic acid degradation-related protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KK47_9GAMM (db=UNIREF evalue=1.1e-25 bit_score=121.7 identity=49.2 coverage=86.5671641791045)
phenylacetic acid degradation-related protein
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=13 to=129 evalue=1.8e-25)
RBG2_15_11
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

7216..7590
DNA (375bp) protein (125aa)
hypothetical protein Tax=RBG_13_Chloroflexi_53_26_curated
7216..7590 + ( gc_cont=0.533)
RBG2_15_12
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

7731..8285
DNA (555bp) protein (185aa)
transmembrane_regions 21..40 Tax=RBG_13_Chloroflexi_53_26_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=116 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
RBG2_15_13
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

8225..8482
DNA (258bp) protein (86aa)
transmembrane_regions 20..42 Tax=RBG_13_Chloroflexi_53_26_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
RBG2_15_14
RBG2, RBG2, RBG2, RBG2, Chloroflexi, Bacteria

Not on your lists

8424..8735
DNA (312bp) protein (104aa)
8424..8735 + ( gc_cont=0.529)
RBG2_15_15
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

8883..9332
DNA (450bp) protein (150aa)
coiled-coil 127..148 Tax=RBG_13_Chloroflexi_53_26_curated
coiled-coil (db=Coil db_id=coil from=127 to=148 evalue=NA)
seg (db=Seg db_id=seg from=127 to=140)
Bet v1-like (db=superfamily db_id=SSF55961 from=2 to=140 evalue=2.2e-17)
RBG2_15_16
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

9405..9596
DNA (192bp) protein (64aa)
seg 11..25 Tax=RBG_13_Chloroflexi_53_26_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=39 to=59)
RBG2_15_17
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

9836..10042
DNA (207bp) protein (69aa)
coiled-coil 11..60 Tax=RBG_13_Chloroflexi_53_26_curated
coiled-coil (db=Coil db_id=coil from=11 to=60 evalue=NA)
RBG2_15_18
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

10141..10416
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_13_Chloroflexi_53_26_curated
10141..10416 + ( gc_cont=0.511)
RBG2_15_19
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(10599..11012)
DNA (414bp) protein (138aa)
putative heat shock protein Tax=RBG_13_Chloroflexi_53_26_curated
putative heat shock protein
Heat shock protein Hsp20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D447_9BACT (db=UNIREF evalue=6.3e-21 bit_score=105.9 identity=41.7 coverage=93.4782608695652)
SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY (db=HMMPanther db_id=PTHR11527 from=1 to=137 evalue=1.6e-34)
RBG2_15_20
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

11271..11513
DNA (243bp) protein (81aa)
hypothetical protein Tax=RBG_13_Chloroflexi_53_26_curated
11271..11513 + ( gc_cont=0.490)
RBG2_15_21
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(11609..13000)
DNA (1392bp) protein (464aa)
selA; L-seryl-tRNA(Sec) selenium transferase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RBG_13_Chloroflexi_53_26_curated
selA; L-seryl-tRNA(Sec) selenium transferase
selA; L-seryl-tRNA(Sec) selenium transferase
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KY76_THERP (db=UNIREF evalue=0.0 bit_score=454.1 identity=53.9 coverage=97.198275862069)
RBG2_15_22
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

13261..14337
DNA (1077bp) protein (359aa)
hypothetical protein; K07112 Tax=RBG_13_Chloroflexi_53_26_curated
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RII6_MOOTA (db=UNIREF evalue=0.0 bit_score=441.0 identity=62.4 coverage=97.2144846796657)
hypothetical protein
hypothetical protein
RBG2_15_23
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

14337..14555
DNA (219bp) protein (73aa)
SirA-like protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=RBG_13_Chloroflexi_53_26_curated
SirA-like protein
SirA-like protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RII9_MOOTA (db=UNIREF evalue=2.2e-17 bit_score=93.2 identity=61.4 coverage=94.5205479452055)
(db=HMMPfam db_id=PF01206 from=2 to=66 evalue=1.0e-14 interpro_id=IPR001455 interpro_description=TusA-like domain)
RBG2_15_24
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

14596..15753
DNA (1158bp) protein (386aa)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16) Tax=RBG_13_Chloroflexi_53_26_curated
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase / selenocysteine lyase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LX53_SYNAS (db=UNIREF evalue=0.0 bit_score=482.6 identity=60.2 coverage=99.2227979274611)
RBG2_15_25
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

15755..16336
DNA (582bp) protein (194aa)
selenium metabolism protein YedF Tax=RBG_13_Chloroflexi_53_26_curated
selenium metabolism protein YedF
Selenium metabolism protein YedF n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K167_DEHLB (db=UNIREF evalue=8.4e-45 bit_score=185.7 identity=50.0 coverage=98.9690721649485)
selenium_YedF: selenium metabolism prot (db=HMMTigr db_id=TIGR03527 from=5 to=193 evalue=1.4e-90 interpro_id=IPR019870 interpro_description=Selenium metabolism protein YedF)
RBG2_15_26
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

16352..16579
DNA (228bp) protein (76aa)
cytoplasmic protein Tax=RBG_13_Chloroflexi_53_26_curated
cytoplasmic protein
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LY27_SYNAS (db=UNIREF evalue=2.7e-10 bit_score=69.7 identity=48.6 coverage=94.7368421052632)
(db=HMMPfam db_id=PF11823 from=5 to=75 evalue=3.3e-24 interpro_id=IPR021778 interpro_description=Protein of unknown function DUF3343)
RBG2_15_27
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

16708..17670
DNA (963bp) protein (321aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_13_Chloroflexi_53_26_curated
selenide, water dikinase
selenide, water dikinase
Selenide, water dikinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=SELD_PELPD (db=UNIREF evalue=0.0 bit_score=392.9 identity=60.2 coverage=99.0654205607477)
RBG2_15_28
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

17674..19530
DNA (1857bp) protein (619aa)
selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RBG_13_Chloroflexi_53_26_curated
selenocysteine-specific translation elongation factor
selenocysteine-specific translation elongation factor
Selenocysteine-specific translation elongation factor n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C588_SPHTD (db=UNIREF evalue=0.0 bit_score=620.9 identity=51.4 coverage=99.1922455573506)
RBG2_15_29
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(19557..20144)
DNA (588bp) protein (196aa)
2 -5 RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Chloroflexi_53_26_curated
2'-5' RNA ligase
2-5 RNA ligase n=1 Tax=Dehalococcoides sp. VS RepID=D2BJ41_DEHSV (db=UNIREF evalue=4.0e-37 bit_score=160.2 identity=45.3 coverage=95.9183673469388)
seg (db=Seg db_id=seg from=105 to=116)
RBG2_15_30
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(20135..20977)
DNA (843bp) protein (281aa)
amidohydrolase 2; K07045 Tax=RBG_13_Chloroflexi_53_26_curated
Amidohydrolase 2 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K2N9_DEHLB (db=UNIREF evalue=0.0 bit_score=307.8 identity=53.0 coverage=98.576512455516)
amidohydrolase 2
amidohydrolase 2
Displaying items 1-30 of 52 in total

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