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RBG2_16

Alias: scaffold_17

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_16_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..740)
DNA (738bp) protein (246aa)
CoB--CoM heterodisulfide reductase-like protein Tax=RBG_13_Chloroflexi_51_36_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Thermincola potens JR RepID=D5XEF5_THEPJ (db=UNIREF evalue=1.4e-39 bit_score=168.7 identity=36.3 coverage=97.1544715447154)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=224 to=235 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
RBG2_16_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

787..1503
DNA (717bp) protein (239aa)
histidine kinase Tax=RBG_13_Chloroflexi_51_36_curated
Histidine kinase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1F8_DEHLB (db=UNIREF evalue=0.0 bit_score=198.0 identity=45.1 coverage=92.4686192468619)
histidine kinase
coiled-coil (db=Coil db_id=coil from=8 to=44 evalue=NA)
RBG2_16_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1726..5826)
DNA (4101bp) protein (1367aa)
Formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_13_Chloroflexi_51_36_curated
Formate dehydrogenase subunit alpha
Formate dehydrogenase subunit alpha
Formate dehydrogenase, alpha subunit n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WK74_9EURY (db=UNIREF evalue=0.0 bit_score=865.9 identity=58.7 coverage=51.865398683248)
RBG2_16_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(5891..6541)
DNA (651bp) protein (217aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermincola potens JR RepID=D5XEX1_THEPJ (db=UNIREF evalue=6.6e-33 bit_score=146.4 identity=37.9 coverage=87.0967741935484)
RBG2_16_5
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(6538..7467)
DNA (930bp) protein (310aa)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.5.7.1) Tax=RBG_13_Chloroflexi_51_36_curated
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.5.7.1)
CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) (EC:1.5.7.1)
Methylenetetrahydrofolate reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVP9_9BACT (db=UNIREF evalue=0.0 bit_score=408.3 identity=66.1 coverage=98.0645161290323)
RBG2_16_6
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7494..8150)
DNA (657bp) protein (219aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Tepidanaerobacter sp. Re1 RepID=F4LVP5_TEPAE (db=UNIREF evalue=4.9e-44 bit_score=183.3 identity=43.2 coverage=93.6073059360731)
(db=HMMPfam db_id=PF12225 from=111 to=203 evalue=1.0e-29 interpro_id=IPR022026 interpro_description=Methylene-tetrahydrofolate reductase C-terminal)
RBG2_16_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8144..8611)
DNA (468bp) protein (156aa)
hybD; hydrogenase maturation protease; K08567 hydrogenase 2 maturation protease [EC:3.4.24.-] Tax=RBG_13_Chloroflexi_51_36_curated
hybD; hydrogenase maturation protease
Hydrogenase maturation protease n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABV9_CARHZ (db=UNIREF evalue=5.4e-29 bit_score=132.9 identity=45.7 coverage=92.948717948718)
seg (db=Seg db_id=seg from=84 to=99)
RBG2_16_8
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8637..10196)
DNA (1560bp) protein (520aa)
hupL; Ni/Fe hydrogenase, large subunit; K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=RBG_13_Chloroflexi_51_36_curated
hupL; Ni/Fe hydrogenase, large subunit
hupL; Ni/Fe hydrogenase, large subunit
Nickel-dependent hydrogenase, large subunit n=5 Tax=Dehalococcoides RepID=A5FSH9_DEHSB (db=UNIREF evalue=0.0 bit_score=630.2 identity=57.6 coverage=99.4230769230769)
RBG2_16_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(10201..11064)
DNA (864bp) protein (288aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=RBG_13_Chloroflexi_51_36_curated
Hydrogenase (NiFe) small subunit HydA n=5 Tax=Dehalococcoides RepID=A5FSH8_DEHSB (db=UNIREF evalue=0.0 bit_score=321.2 identity=52.2 coverage=94.4444444444444)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
RBG2_16_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11127..11894)
DNA (768bp) protein (256aa)
nitrogenase reductase-like protein; K07321 CO dehydrogenase maturation factor Tax=RBG_13_Chloroflexi_51_36_curated
nitrogenase reductase-like protein
Nitrogenase reductase related protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27746_METTH (db=UNIREF evalue=0.0 bit_score=219.9 identity=44.9 coverage=93.359375)
seg (db=Seg db_id=seg from=2 to=20)
RBG2_16_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11891..13798)
DNA (1908bp) protein (636aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_13_Chloroflexi_51_36_curated
NADH dehydrogenase (Quinone) n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CMB3_DESK7 (db=UNIREF evalue=0.0 bit_score=808.1 identity=60.9 coverage=97.3270440251572)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
RBG2_16_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(13899..14414)
DNA (516bp) protein (172aa)
ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2 (EC:1.6.5.3 1.6.99.3) Tax=RBG_13_Chloroflexi_51_36_curated
ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2 (EC:1.6.5.3 1.6.99.3)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Thermincola potens JR RepID=D5XE11_THEPJ (db=UNIREF evalue=3.4e-40 bit_score=170.2 identity=50.3 coverage=86.046511627907)
seg (db=Seg db_id=seg from=160 to=171)
RBG2_16_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(14434..15798)
DNA (1365bp) protein (455aa)
acetyl-CoA decarbonylase/synthase complex subunit gamma; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-] Tax=RBG_13_Chloroflexi_51_36_curated
CO dehydrogenase/acetyl-CoA synthase delta subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1F5_DESAP (db=UNIREF evalue=0.0 bit_score=497.3 identity=53.8 coverage=98.2417582417582)
acetyl-CoA decarbonylase/synthase complex subunit gamma
acetyl-CoA decarbonylase/synthase complex subunit gamma
RBG2_16_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(15866..17113)
DNA (1248bp) protein (416aa)
acetyl-CoA decarbonylase/synthase complex subunit beta (EC:2.3.1.169) Tax=RBG_13_Chloroflexi_51_36_curated
acetyl-CoA decarbonylase/synthase complex subunit beta (EC:2.3.1.169)
acetyl-CoA decarbonylase/synthase complex subunit beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1F4_DESAP (db=UNIREF evalue=0.0 bit_score=470.7 identity=55.3 coverage=95.4326923076923)
RBG2_16_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(17120..17671)
DNA (552bp) protein (184aa)
CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon; K00195 acetyl-CoA decarbonylase/synthase complex subunit epsilon Tax=RBG_13_Chloroflexi_51_36_curated
CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon
CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1E9_DESAP (db=UNIREF evalue=0.0 bit_score=191.8 identity=49.7 coverage=94.5652173913043)
DHS-like NAD/FAD-binding domain (db=superfamily db_id=SSF52467 from=17 to=179 evalue=1.7e-45)
RBG2_16_16
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(17684..19990)
DNA (2307bp) protein (769aa)
acetyl-CoA decarbonylase/synthase complex subunit alpha (EC:1.2.99.2); K00192 acetyl-CoA decarbonylase/synthase complex subunit alpha [EC:1.2.99.2] Tax=RBG_13_Chloroflexi_51_36_curated
acetyl-CoA decarbonylase/synthase complex subunit alpha (EC:1.2.99.2)
acetyl-CoA decarbonylase/synthase complex subunit alpha (EC:1.2.99.2)
CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1E8_DESAP (db=UNIREF evalue=0.0 bit_score=974.9 identity=59.4 coverage=99.3498049414824)
RBG2_16_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(19994..20899)
DNA (906bp) protein (302aa)
acetyl-CoA decarbonylase/synthase complex subunit delta; K00194 acetyl-CoA decarbonylase/synthase complex subunit delta Tax=RBG_13_Chloroflexi_51_36_curated
Corrinoid/iron-sulfur protein, small subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1F7_DESAP (db=UNIREF evalue=0.0 bit_score=315.1 identity=53.2 coverage=95.6953642384106)
acetyl-CoA decarbonylase/synthase complex subunit delta
acetyl-CoA decarbonylase/synthase complex subunit delta
RBG2_16_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(20912..21799)
DNA (888bp) protein (296aa)
dihydropteroate synthase, DHPS Tax=RBG_13_Chloroflexi_51_36_curated
dihydropteroate synthase, DHPS
dihydropteroate synthase, DHPS
Dihydropteroate synthase, DHPS n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1F6_DESAP (db=UNIREF evalue=0.0 bit_score=343.6 identity=58.5 coverage=97.2972972972973)
RBG2_16_19
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

22054..22722
DNA (669bp) protein (223aa)
dnaJ-1; DnaJ protein; K05516 curved DNA-binding protein Tax=RBG_13_Chloroflexi_51_36_curated
dnaJ-1; dnaJ protein
UPI0000164CD5 related cluster n=1 Tax=unknown RepID=UPI0000164CD5 (db=UNIREF evalue=1.5e-35 bit_score=155.2 identity=43.9 coverage=93.7219730941704)
seg (db=Seg db_id=seg from=99 to=115)
RBG2_16_20
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

22745..23380
DNA (636bp) protein (212aa)
dienelactone hydrolase; K07018 Tax=RBG_13_Chloroflexi_51_36_curated
dienelactone hydrolase
Dienelactone hydrolase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CK11_DESK7 (db=UNIREF evalue=0.0 bit_score=194.9 identity=44.1 coverage=97.6415094339623)
seg (db=Seg db_id=seg from=146 to=157)
RBG2_16_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(23514..23957)
DNA (444bp) protein (148aa)
C_GCAxxG_C_C family protein Tax=RBG_13_Chloroflexi_51_36_curated
C_GCAxxG_C_C family protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHS4_9FIRM (db=UNIREF evalue=2.2e-35 bit_score=154.1 identity=50.0 coverage=97.972972972973)
hypothetical protein
seg (db=Seg db_id=seg from=39 to=56)
RBG2_16_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(24020..25069)
DNA (1050bp) protein (350aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RBG_13_Chloroflexi_51_36_curated
Threonine aldolase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1X7_DEHLB (db=UNIREF evalue=0.0 bit_score=401.0 identity=61.6 coverage=94.2857142857143)
threonine aldolase (EC:4.1.2.5)
threonine aldolase (EC:4.1.2.5)
RBG2_16_23
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(25081..26043)
DNA (963bp) protein (321aa)
arcB; ornithine cyclodeaminase; K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RBG_13_Chloroflexi_51_36_curated
alanine dehydrogenase (EC:1.4.1.1)
alanine dehydrogenase (EC:1.4.1.1)
Ornithine cyclodeaminase n=1 Tax=Dehalococcoides sp. VS RepID=D2BG63_DEHSV (db=UNIREF evalue=0.0 bit_score=368.2 identity=57.5 coverage=98.7538940809969)
RBG2_16_24
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

26342..27160
DNA (819bp) protein (273aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Marivirga tractuosa DSM 4126 RepID=E4TM50_MARTH (db=UNIREF evalue=8.3e-33 bit_score=146.4 identity=32.2 coverage=93.7728937728938)
seg (db=Seg db_id=seg from=6 to=25)
RBG2_16_25
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

27354..28436
DNA (1083bp) protein (361aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=RBG_13_Chloroflexi_51_36_curated
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0J9_DESOH (db=UNIREF evalue=0.0 bit_score=260.4 identity=41.9 coverage=90.8587257617728)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=310 to=321 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
RBG2_16_26
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

28647..29390
DNA (744bp) protein (248aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1Z4_DEHLB (db=UNIREF evalue=0.0 bit_score=273.5 identity=52.9 coverage=96.3709677419355)
seg (db=Seg db_id=seg from=151 to=164)
RBG2_16_27
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(29560..29865)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_36_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides RepID=A5FQ32_DEHSB (db=UNIREF evalue=2.8e-34 bit_score=149.8 identity=63.2 coverage=98.0392156862745)
Displaying 27 items

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