ggKbase home page

RBG2_19

Alias: scaffold_21

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_19_1
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

3..1157
DNA (1155bp) protein (385aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_13_Chloroflexi_52_14_curated
Methionine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1T4_DEHLB (db=UNIREF evalue=0.0 bit_score=514.2 identity=63.0 coverage=97.6623376623377)
methionyl-tRNA synthetase
no description (db=Gene3D db_id=G3DSA:1.10.730.10 from=213 to=352 evalue=1.3e-27)
RBG2_19_2
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1185..4208
DNA (3024bp) protein (1008aa)
RND multidrug efflux transporter {ECO:0000313|EMBL:AKG52736.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
membrane protein
membrane protein
Integral membrane efflux protein n=3 Tax=Dehalococcoides RepID=D2BJL7_DEHSV (db=UNIREF evalue=0.0 bit_score=1059.3 identity=53.8 coverage=98.7103174603175)
RBG2_19_3

Not on your lists

4247..5212
DNA (966bp) protein (322aa)
Marine sediment metagenome DNA, contig: S01H4_L00567 {ECO:0000313|EMBL:GAG61350.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Polyprenyl synthetase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1T5_DEHLB (db=UNIREF evalue=0.0 bit_score=272.3 identity=44.7 coverage=98.1366459627329)
polyprenyl synthetase
POLYPRENYL_SYNTHASE_2 (db=PatternScan db_id=PS00444 from=203 to=215 evalue=0.0 interpro_id=IPR000092 interpro_description=Polyprenyl synthetase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299))
RBG2_19_4
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(5213..5662)
DNA (450bp) protein (150aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RBG_13_Chloroflexi_54_8_curated
recO; DNA repair protein
DNA repair protein recO n=1 Tax=Dehalococcoides sp. VS RepID=D2BH72_DEHSV (db=UNIREF evalue=6.0e-25 bit_score=119.4 identity=40.5 coverage=94.0)
ArfGap/RecO-like zinc finger (db=superfamily db_id=SSF57863 from=2 to=127 evalue=1.0e-26 interpro_id=IPR001164 interpro_description=Arf GTPase activating protein GO=Molecular Function: ARF GTPase activator activity (GO:0008060), Molecular Function: zinc ion binding (GO:0008270), Biological Process: regulation of ARF GTPase activity (GO:0032312))
Displaying 4 items

View Taxonomy