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RBG2_150

Alias: scaffold_152

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG2_150_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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2..469
DNA (468bp) protein (156aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_51_36_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZZ4_THERP (db=UNIREF evalue=0.0 bit_score=224.2 identity=75.9 coverage=92.3076923076923)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
(db=HMMPfam db_id=PF00562 from=14 to=71 evalue=1.0e-25 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
RBG2_150_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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456..707
DNA (252bp) protein (84aa)
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_51_36_curated
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=3.8e-21 bit_score=105.9 identity=78.3 coverage=70.2380952380952)
seg (db=Seg db_id=seg from=60 to=69)
RBG2_150_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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739..1032
DNA (294bp) protein (98aa)
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_51_36_curated
DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta' n=12 Tax=Bifidobacterium RepID=RPOC_BIFAA (db=UNIREF evalue=1.8e-22 bit_score=110.5 identity=56.8 coverage=94.8979591836735)
coiled-coil (db=Coil db_id=coil from=66 to=87 evalue=NA)
Displaying 3 items

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