Alias: RBG_1351c3_9
name | lists | location/seqs | annotations | notes |
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RBG1351_9_1
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(2..1969)
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DNA internalization-related competence protein ComEC/Rec2 Tax=RBG_13_Chloroflexi_51_52_curated
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 n=3 Tax=Dehalococcoides mccartyi RepID=A5FP78_DEHSB (db=UNIREF evalue=8.0e-144 bit_score=516.5 identity=42.7 coverage=98.32317073170732)
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RBG1351_9_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(2118..2498)
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putative competence protein ComEA Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=91 to=104)
seg (db=Seg db_id=seg from=11 to=29)
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RBG1351_9_3
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(2677..3339)
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trkA1; Trk system cation transport protein; K03499 trk system potassium uptake protein TrkA Tax=RBG_13_Chloroflexi_51_52_curated
portal protein
TrkA-N domain protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K2G2_DEHLB (db=UNIREF evalue=1.0e-66 bit_score=258.8 identity=57.9 coverage=98.64253393665159)
TrkA C-terminal domain-like (db=superfamily db_id=SSF116726 from=129 to=219 evalue=1.1e-12)
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RBG1351_9_4
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(3341..3745)
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potassium uptake protein; K03499 trk system potassium uptake protein TrkA Tax=RBG_13_Chloroflexi_51_52_curated
potassium transporter TrkA
TrkA-N domain protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K2G3_DEHLB (db=UNIREF evalue=2.5e-44 bit_score=183.7 identity=65.2 coverage=97.03703703703704)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=130 evalue=1.7e-28 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
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RBG1351_9_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(3776..4189)
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uslA; Na+/H+ antiporter C-terminal domain/universal stress protein-like protein Tax=RBG_13_Chloroflexi_51_52_curated
universal stress protein
UspA domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FP82_DEHSB (db=UNIREF evalue=4.4e-36 bit_score=156.4 identity=54.0 coverage=97.82608695652173)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=136 evalue=1.7e-20 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
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RBG1351_9_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(4264..5778)
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UspA domain-containing protein; K03294 basic amino acid/polyamine antiporter, APA family Tax=RBG_13_Chloroflexi_51_52_curated
UspA domain-containing protein
UspA domain-containing protein
UspA domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FBR2_CONWI (db=UNIREF evalue=2.9e-101 bit_score=374.8 identity=44.0 coverage=86.73267326732673)
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RBG1351_9_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
5907..6164
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Marine sediment metagenome DNA, contig: S06H3_S08753 Tax=RBG_13_Chloroflexi_51_52_curated
5907..6164 + ( gc_cont=0.457)
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RBG1351_9_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(6214..6702)
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def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_13_Chloroflexi_51_52_curated
peptide deformylase
Peptide deformylase n=5 Tax=Dehalococcoides mccartyi RepID=DEF_DEHSC (db=UNIREF evalue=2.4e-41 bit_score=174.1 identity=56.2 coverage=96.93251533742331)
Peptide deformylase (db=HMMPIR db_id=PIRSF004749 from=1 to=159 evalue=1.3e-41 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: peptide deformylase activity (GO:0042586))
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RBG1351_9_9
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(6740..9154)
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priA; primosomal protein N; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_13_Chloroflexi_51_52_curated
priA; primosomal protein N
priA; primosomal protein N
Primosomal protein N, (Replication factor Y) (Superfamily II helicase) n=1 Tax=Dehalococcoides sp. VS RepID=D2BGI9_DEHSV (db=UNIREF evalue=1.3e-244 bit_score=851.7 identity=52.5 coverage=99.50310559006212)
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RBG1351_9_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(9216..9839)
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50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RBG_13_Chloroflexi_51_52_curated
50S ribosomal protein L19
50S ribosomal protein L19 n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8ND02_9DEIN (db=UNIREF evalue=1.1e-30 bit_score=139.0 identity=48.9 coverage=62.5)
coiled-coil (db=Coil db_id=coil from=103 to=124 evalue=NA)
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RBG1351_9_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(9860..10633)
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trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_13_Chloroflexi_51_52_curated
trmD; tRNA (guanine37-N1) -methyltransferase (EC:2.1.1.228)
trmD; tRNA (guanine37-N1) -methyltransferase (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase n=3 Tax=Dehalococcoides mccartyi RepID=TRMD_DEHSB (db=UNIREF evalue=2.0e-82 bit_score=311.2 identity=58.4 coverage=95.34883720930233)
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RBG1351_9_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(10617..11123)
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molybdenum cofactor synthesis domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor synthesis domain protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADX5_CARHZ (db=UNIREF evalue=3.0e-50 bit_score=203.8 identity=64.8 coverage=93.49112426035504)
(db=HMMPfam db_id=PF00994 from=5 to=148 evalue=1.3e-35 interpro_id=IPR001453 interpro_description=Molybdopterin binding GO=Biological Process: Mo-molybdopterin cofactor biosynthetic process (GO:0006777))
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RBG1351_9_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
11378..11806
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mraZ; MraZ protein; K03925 MraZ protein Tax=RBG_13_Chloroflexi_51_52_curated
cell division protein MraZ
Protein MraZ n=4 Tax=Dehalococcoides mccartyi RepID=MRAZ_DEHE1 (db=UNIREF evalue=1.7e-43 bit_score=181.0 identity=57.7 coverage=97.9020979020979)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=137 evalue=1.3e-37)
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RBG1351_9_14
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
11812..12861
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mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RBG_16_Chloroflexi_50_11_curated
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=5 Tax=Dehalococcoides mccartyi RepID=RSMH_DEHE1 (db=UNIREF evalue=5.3e-110 bit_score=403.3 identity=63.4 coverage=90.28571428571428)
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RBG1351_9_15
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
12954..14168
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cell division protein FtsA; K03590 cell division protein FtsA Tax=RBG_16_Chloroflexi_50_11_curated
ftsA-1; cell division protein FtsA
ftsA-1; cell division protein FtsA
Cell division protein ftsA n=5 Tax=Dehalococcoides mccartyi RepID=A5FSB8_DEHSB (db=UNIREF evalue=1.3e-168 bit_score=598.2 identity=73.0 coverage=99.50617283950616)
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RBG1351_9_16
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria
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Not on your lists |
14218..15351
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ftsZ-1; cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_13_Chloroflexi_51_18_curated
cell division protein FtsZ
cell division protein FtsZ
Cell division protein ftsZ n=5 Tax=Dehalococcoides mccartyi RepID=A5FSB9_DEHSB (db=UNIREF evalue=8.7e-151 bit_score=538.9 identity=75.7 coverage=94.17989417989418)
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RBG1351_9_17
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
15613..16167
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methyltransferase Tax=RBG_16_Chloroflexi_50_11_curated
methyltransferase
Methyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=D2BG98_DEHSV (db=UNIREF evalue=1.7e-51 bit_score=208.0 identity=53.0 coverage=98.37837837837839)
N6_MTASE (db=PatternScan db_id=PS00092 from=115 to=121 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
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RBG1351_9_18
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria
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Not on your lists |
16164..16649
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coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RBG_13_Chloroflexi_52_12_curated
Pantetheine-phosphate adenylyltransferase n=1 Tax=uncultured prokaryote RepID=H5SL54_9ZZZZ (db=UNIREF evalue=8.8e-44 bit_score=182.2 identity=51.9 coverage=98.14814814814815)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Q8XL96_CLOPE_Q8XL96; (db=BlastProDom db_id=PD016147 from=11 to=64 evalue=0.002)
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RBG1351_9_19
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria
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Not on your lists |
16713..16919
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fdx; ferredoxin Tax=RBG_13_Chloroflexi_51_18_curated
iron-sulfur cluster-binding protein
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FSN3_DEHSB (db=UNIREF evalue=2.9e-20 bit_score=102.8 identity=74.1 coverage=82.6086956521739)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=9 to=20 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
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RBG1351_9_20
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(17097..17588)
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integral membrane colicin V production protein; K03558 membrane protein required for colicin V production Tax=RBG_13_Chloroflexi_51_18_curated
colicin V production CvpA
Colicin V production protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1I9_DEHLB (db=UNIREF evalue=7.6e-35 bit_score=152.5 identity=48.8 coverage=98.17073170731707)
seg (db=Seg db_id=seg from=7 to=20)
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RBG1351_9_21
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(17667..18446)
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proC; pyrroline-5-carboxylate reductase; K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_16_Chloroflexi_50_11_curated
pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase n=2 Tax=Dehalococcoides mccartyi RepID=Q3ZA08_DEHE1 (db=UNIREF evalue=4.0e-62 bit_score=243.8 identity=50.6 coverage=98.46153846153847)
P5CR (db=PatternScan db_id=PS00521 from=210 to=232 evalue=0.0 interpro_id=IPR000304 interpro_description=Pyrroline-5-carboxylate reductase GO=Molecular Function: pyrroline-5-carboxylate reductase activity (GO:0004735), Biological Process: proline biosynthetic process (GO:0006561), Biological Process: oxidation-reduction process (GO:0055114))
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RBG1351_9_22
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(18481..20919)
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leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=RBG_16_Chloroflexi_57_8_curated
Leucine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1G1_DEHLB (db=UNIREF evalue=0.0 bit_score=1232.2 identity=68.7 coverage=99.7539975399754)
leucyl-tRNA synthetase
leucyl-tRNA synthetase
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RBG1351_9_23
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(21059..21589)
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hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Actinoplanes sp. SE50/110 RepID=G8SAR8_ACTS5 (db=UNIREF evalue=1.5e-15 bit_score=88.6 identity=32.9 coverage=83.05084745762711)
coiled-coil (db=Coil db_id=coil from=8 to=29 evalue=NA)
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RBG1351_9_24
unknown
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Not on your lists |
comp(21854..22525)
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21854..22525 - ( gc_cont=0.443)
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RBG1351_9_25
CG_Pacearch_01, Pacearchaeota, Archaea
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Not on your lists |
comp(22583..24466)
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Tax=CG_Pacearch_01
coiled-coil (db=Coil db_id=coil from=472 to=493 evalue=NA)
seg (db=Seg db_id=seg from=12 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
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RBG1351_9_26
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
24634..25581
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auxin efflux carrier family protein; K07088 Tax=RBG_13_Chloroflexi_51_52_curated
auxin efflux carrier family protein
auxin efflux carrier family protein
Auxin Efflux Carrier n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1R0_DESRD (db=UNIREF evalue=5.9e-84 bit_score=316.6 identity=47.6 coverage=99.0506329113924)
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RBG1351_9_27
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
25701..25925
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hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRL0_DEHSB (db=UNIREF evalue=4.6e-11 bit_score=72.4 identity=41.9 coverage=97.33333333333334)
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RBG1351_9_28
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(25936..26055)
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Tax=RBG_13_Chloroflexi_51_52_curated
25936..26055 - ( gc_cont=0.442)
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RBG1351_9_29
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
26327..26653
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Tax=RBG_13_Chloroflexi_51_52_curated
26327..26653 + ( gc_cont=0.526)
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RBG1351_9_30
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria
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Not on your lists |
comp(27009..28454)
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Ig-like domain-containing protein Tax=RBG_13_Chloroflexi_51_52_curated
Ig-like domain-containing protein
Ig-like domain-containing protein n=1 Tax=Corallococcus coralloides DSM 2259 RepID=H8MRG1_CORCM (db=UNIREF evalue=1.4e-15 bit_score=90.1 identity=36.7 coverage=28.42323651452282)
seg (db=Seg db_id=seg from=160 to=183)
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