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RBG1351_10

Alias: RBG_1351c3_10

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_10_1
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
L-aspartate oxidase; K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=RBG_13_Chloroflexi_51_18_curated
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=34 evalue=1.7e-09)
L-ASPARTATE OXIDASE (db=HMMPanther db_id=PTHR11632:SF6 from=2 to=33 evalue=1.3e-06)
SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT (db=HMMPanther db_id=PTHR11632 from=2 to=33 evalue=1.3e-06)
RBG1351_10_2
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

658..1233
DNA (576bp) protein (192aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RB
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein pyrR n=5 Tax=Dehalococcoides mccartyi RepID=PYRR_DEHE1 (db=UNIREF evalue=1.4e-59 bit_score=235.0 identity=64.8 coverage=91.14583333333334)
PHOSPHOHEXOMUTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR22573 from=3 to=152 evalue=2.8e-05)
RBG1351_10_3
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

1379..2662
DNA (1284bp) protein (428aa)
aspartate carbamoyltransferase catalytic subunit Tax=RBG_16_Chloroflexi_50_11_curated
aspartate carbamoyltransferase
Aspartate carbamoyltransferase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZLG6_THELI (db=UNIREF evalue=8.0e-60 bit_score=236.9 identity=47.3 coverage=59.57943925233645)
no description (db=Gene3D db_id=G3DSA:3.40.50.1370 from=213 to=301 evalue=0.00012)
RBG1351_10_4
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

2667..3980
DNA (1314bp) protein (438aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_16_Chloroflexi_56_11_curated
dihydroorotase, multifunctional complex type
dihydroorotase, multifunctional complex type
Dihydroorotase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0T7_DEHLB (db=UNIREF evalue=1.4e-128 bit_score=465.3 identity=53.1 coverage=96.57534246575342)
RBG1351_10_5
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

4037..4252
DNA (216bp) protein (72aa)
fchA; methenyltetrahydrofolate cyclohydrolase Tax=RBG_13_Chloroflexi_52_12_curated
formiminotransferase-cyclodeaminase
Methenyltetrahydrofolate cyclohydrolase n=7 Tax=Alphaproteobacteria RepID=FCHA_METEA (db=UNIREF evalue=2.5e-14 bit_score=83.2 identity=60.3 coverage=86.11111111111111)
seg (db=Seg db_id=seg from=18 to=42)
RBG1351_10_6
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

4348..5226
DNA (879bp) protein (293aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RBG_13_Chloroflexi_52_12
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Roseiflexus sp. RS-1 RepID=FOLD_ROSS1 (db=UNIREF evalue=5.8e-78 bit_score=296.6 identity=51.2 coverage=95.90443686006826)
no description (db=Gene3D db_id=G3DSA:3.40.192.10 from=29 to=114 evalue=1.9e-18)
RBG1351_10_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5349..6113
DNA (765bp) protein (255aa)
Putative redox-active protein (C_GCAxxG_C_C) Tax=RBG_16_Anaeromyxobacter_69_14_curated
seg (db=Seg db_id=seg from=34 to=52)
seg (db=Seg db_id=seg from=55 to=66)
seg (db=Seg db_id=seg from=162 to=187)
RBG1351_10_8
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

6207..6554
DNA (348bp) protein (116aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
Putative uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIL1_METAL (db=UNIREF evalue=7.5e-29 bit_score=132.1 identity=56.5 coverage=98.27586206896551)
hypothetical protein
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=1 to=115 evalue=1.2e-14 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like)
RBG1351_10_9

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6693..6923
DNA (231bp) protein (77aa)
Marine sediment metagenome DNA, contig: S01H1_S41109 {ECO:0000313|EMBL:GAG49801.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
6693..6923 + ( gc_cont=0.351)
RBG1351_10_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

7011..7259
DNA (249bp) protein (83aa)
Tax=RBG_13_Chloroflexi_51_52_curated
7011..7259 + ( gc_cont=0.353)
RBG1351_10_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

7266..7793
DNA (528bp) protein (176aa)
Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=5 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
RBG1351_10_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

7906..8670
DNA (765bp) protein (255aa)
pyrK; dihydroorotate dehydrogenase, electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RBG_13_Chloroflexi_51_52_curated
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase, electron transfer subunit n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z783_DEHE1 (db=UNIREF evalue=3.8e-65 bit_score=253.8 identity=49.0 coverage=97.6470588235294)
Cytochrome-c3 hydrogenase, gamma subunit (db=HMMPIR db_id=PIRSF006816 from=1 to=254 evalue=1.6e-66 interpro_id=IPR012165 interpro_description=Cytochrome-c3 hydrogenase, gamma subunit GO=Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
RBG1351_10_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

8797..8916
DNA (120bp) protein (40aa)
Desulfoferrodoxin Dfx 6..36 Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=19 to=32)
(db=HMMPfam db_id=PF06397 from=6 to=36 evalue=1.7e-10 interpro_id=IPR004462 interpro_description=Desulfoferrodoxin Dfx GO=Molecular Function: iron ion binding (GO:0005506))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=3 to=39 evalue=2.8e-07)
RBG1351_10_14
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

8944..9087
DNA (144bp) protein (48aa)
Marine sediment metagenome DNA, contig: S01H1_S42729 Tax=RBG_13_Chloroflexi_52_12_curated
(db=HMMPfam db_id=PF06397 from=7 to=37 evalue=2.5e-07 interpro_id=IPR004462 interpro_description=Desulfoferrodoxin Dfx GO=Molecular Function: iron ion binding (GO:0005506))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=3 to=39 evalue=4.8e-06)
RBG1351_10_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


comp(9172..9525)
DNA (354bp) protein (118aa)
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RBG_13_Chloroflexi_51_52_curated
Ribosomal protein S20 (BS20) n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EDR1_9BACT (db=UNIREF evalue=1.3e-15 bit_score=88.2 identity=54.2 coverage=69.49152542372882)
30S ribosomal protein S20
seg (db=Seg db_id=seg from=45 to=56)
RBG1351_10_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(9539..11752)
DNA (2214bp) protein (738aa)
spoT; relA/spoT protein, GTP pyrophosphokinase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RBG_13_Chloroflexi_51_52_curated
spoT; relA/spoT protein, GTP pyrophosphokinase
spoT; relA/spoT protein, GTP pyrophosphokinase
(P)ppGpp synthetase I, SpoT/RelA n=5 Tax=Dehalococcoides mccartyi RepID=A5FSR6_DEHSB (db=UNIREF evalue=1.9e-271 bit_score=940.6 identity=59.3 coverage=97.15447154471545)
RBG1351_10_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(11846..12253)
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S03H2_S15143 Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=60 to=67)
RBG1351_10_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(12279..12914)
DNA (636bp) protein (212aa)
putative hydrolase Tax=RBG_13_Chloroflexi_51_52_curated
NUDIX hydrolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TK19_9CHLR (db=UNIREF evalue=2.3e-28 bit_score=131.3 identity=38.0 coverage=96.22641509433963)
putative hydrolase
RBG1351_10_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists


13036..14292
DNA (1257bp) protein (419aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RBG_13_Chloroflexi_51_52_curated
histidyl-tRNA synthetase
histidyl-tRNA synthetase
Histidine--tRNA ligase n=5 Tax=Dehalococcoides mccartyi RepID=SYH_DEHE1 (db=UNIREF evalue=2.3e-152 bit_score=544.3 identity=62.4 coverage=97.61336515513126)
RBG1351_10_20
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

14671..17622
DNA (2952bp) protein (984aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=841 to=856)
seg (db=Seg db_id=seg from=594 to=620)
RBG1351_10_21
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(18122..19405)
DNA (1284bp) protein (428aa)
molybdopterin biosynthesis enzyme Tax=RBG_13_Chloroflexi_51_52_curated
Molybdenum cofactor synthesis domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FEF1_9DELT (db=UNIREF evalue=4.1e-88 bit_score=330.9 identity=45.5 coverage=92.5233644859813)
molybdopterin biosynthesis enzyme
molybdopterin biosynthesis enzyme
RBG1351_10_22
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

19494..21653
DNA (2160bp) protein (720aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K387_DEHLB (db=UNIREF evalue=3.2e-69 bit_score=268.9 identity=28.4 coverage=90.83333333333333)
hypothetical protein
seg (db=Seg db_id=seg from=141 to=153)
RBG1351_10_23
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

21702..22619
DNA (918bp) protein (306aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K387_DEHLB (db=UNIREF evalue=6.1e-46 bit_score=190.3 identity=41.4 coverage=83.00653594771242)
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=300)
RBG1351_10_24
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(22768..22998)
DNA (231bp) protein (77aa)
Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=42 to=60)
RBG1351_10_25
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(23061..23216)
DNA (156bp) protein (52aa)
Marine sediment metagenome DNA, contig: S01H1_S22595 Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=5 to=17)
RBG1351_10_26
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(23264..23419)
DNA (156bp) protein (52aa)
Marine sediment metagenome DNA, contig: S01H1_L03931 Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
RBG1351_10_27
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

23661..23849
DNA (189bp) protein (63aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=RBG_13_Chloroflexi_51_52_curated
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJ32_9GAMM (db=UNIREF evalue=4.5e-12 bit_score=75.5 identity=56.5 coverage=96.82539682539682)
4-oxalocrotonate tautomerase
Tautomerase/MIF (db=superfamily db_id=SSF55331 from=2 to=60 evalue=1.4e-14 interpro_id=IPR014347 interpro_description=Tautomerase)
RBG1351_10_28
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

23859..24422
DNA (564bp) protein (188aa)
NADPH-dependent FMN reductase Tax=RBG_13_Chloroflexi_51_52_curated
NADPH-dependent FMN reductase n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NH43_DESAR (db=UNIREF evalue=3.6e-49 bit_score=200.3 identity=51.1 coverage=97.3404255319149)
NADPH-dependent FMN reductase
RBG1351_10_29
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(24419..25159)
DNA (741bp) protein (247aa)
4Fe-4S ferredoxin Tax=RBG_13_Chloroflexi_51_52_curated
4Fe-4S ferredoxin
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C6L0_9DELT (db=UNIREF evalue=3.8e-62 bit_score=243.8 identity=50.4 coverage=96.35627530364373)
seg (db=Seg db_id=seg from=59 to=70)
RBG1351_10_30
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(25140..25316)
DNA (177bp) protein (59aa)
Tax=RBG_13_Chloroflexi_51_52_curated
25140..25316 - ( gc_cont=0.395)
Displaying items 1-30 of 50 in total

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