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RBG1351_33

Alias: RBG_1351c3_33

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_33_1
unknown

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3..80
DNA (78bp) protein (26aa)
3..80 + ( gc_cont=0.308)
RBG1351_33_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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261..758
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_13_Chloroflexi_51_52_curated
3-isopropylmalate dehydratase small subunit
3-isopropylmalate dehydratase small subunit 2 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K051_DEHLB (db=UNIREF evalue=1.1e-62 bit_score=245.0 identity=74.5 coverage=96.3855421686747)
leud: 3-isopropylmalate dehydratase, small (db=HMMTigr db_id=TIGR02084 from=5 to=160 evalue=1.7e-88 interpro_id=IPR011824 interpro_description=3-isopropylmalate dehydratase, small subunit, bacterial-like GO=Molecular Function: 3-isopropylmalate dehydratase activity (GO:0003861), Biological Process: leucine biosynthetic process (GO:0009098), Cellular Component: 3-isopropylmalate dehydratase complex (GO:0009316))
RBG1351_33_3
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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786..1880
DNA (1095bp) protein (365aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85) Tax=RBG_13_Chloroflexi_51_52_curated
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=5 Tax=Dehalococcoides mccartyi RepID=LEU3_DEHSC (db=UNIREF evalue=4.8e-138 bit_score=496.5 identity=67.9 coverage=99.45205479452055)
RBG1351_33_4
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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1884..3473
DNA (1590bp) protein (530aa)
alpha-isopropylmalate/homocitrate synthase transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RBG_13_Chloroflexi_51_52_curated
alpha-isopropylmalate/homocitrate synthase family transferase
alpha-isopropylmalate/homocitrate synthase family transferase
2-isopropylmalate synthase n=5 Tax=Dehalococcoides mccartyi RepID=A5FR51_DEHSB (db=UNIREF evalue=5.0e-197 bit_score=693.0 identity=62.2 coverage=99.43396226415095)
RBG1351_33_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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3577..3876
DNA (300bp) protein (100aa)
transmembrane protein Tax=RBG_13_Chloroflexi_51_52_curated
transmembrane protein
Putative transmembrane protein n=1 Tax=Marivirga tractuosa DSM 4126 RepID=E4TQX0_MARTH (db=UNIREF evalue=9.4e-20 bit_score=101.7 identity=46.8 coverage=93.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
RBG1351_33_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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4093..4683
DNA (591bp) protein (197aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Conserved domain protein n=3 Tax=Dehalococcoides mccartyi RepID=Q3ZXJ2_DEHSC (db=UNIREF evalue=3.2e-40 bit_score=170.6 identity=41.3 coverage=98.98477157360406)
coiled-coil (db=Coil db_id=coil from=124 to=149 evalue=NA)
RBG1351_33_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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4692..5393
DNA (702bp) protein (234aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FR46_DEHSB (db=UNIREF evalue=4.7e-62 bit_score=243.4 identity=54.9 coverage=94.87179487179486)
RBG1351_33_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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5425..6081
DNA (657bp) protein (219aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RBG_13_Chloroflexi_51_52_curated
thymidylate synthase
thymidylate synthase
Thymidylate synthase-like protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FR57_DEHSB (db=UNIREF evalue=3.8e-90 bit_score=336.7 identity=71.2 coverage=96.34703196347031)
RBG1351_33_9
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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6112..6882
DNA (771bp) protein (257aa)
sir2 family protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RBG_13_Chloroflexi_51_52_curated
NAD-dependent deacetylase 1 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YFG9_9DELT (db=UNIREF evalue=2.7e-71 bit_score=274.2 identity=51.2 coverage=97.66536964980544)
sir2 family protein
seg (db=Seg db_id=seg from=175 to=187)
RBG1351_33_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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7107..8231
DNA (1125bp) protein (375aa)
hamp domain/gaf domain/hd domain protein Tax=RBG_13_Chloroflexi_51_52_curated
hamp domain/gaf domain/hd domain-containing protein
Hamp domain/gaf domain/hd domain protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIS1_THEYD (db=UNIREF evalue=3.1e-60 bit_score=238.0 identity=36.4 coverage=93.86666666666666)
(db=HMMPfam db_id=PF01966 from=203 to=323 evalue=1.6e-17 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
RBG1351_33_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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8299..9588
DNA (1290bp) protein (430aa)
Fe-S oxidoreductase, coproporphyrinogen III oxidase Tax=RBG_13_Chloroflexi_51_52_curated
Fe-S oxidoreductase, coproporphyrinogen III oxidase
Fe-S oxidoreductase, coproporphyrinogen III oxidase
Fe-S oxidoreductase, coproporphyrinogen III oxidase n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C3U7_9DELT (db=UNIREF evalue=1.0e-86 bit_score=326.2 identity=43.0 coverage=85.11627906976744)
RBG1351_33_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(9589..10317)
DNA (729bp) protein (243aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_13_Chloroflexi_51_52_curated
ubiquinone/menaquinone biosynthesis methyltransferase
Demethylmenaquinone methyltransferase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=D7BAN2_MEISD (db=UNIREF evalue=2.8e-41 bit_score=174.5 identity=40.4 coverage=94.65020576131687)
UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108:SF24 from=14 to=239 evalue=1.1e-62 interpro_id=IPR004033 interpro_description=UbiE/COQ5 methyltransferase GO=Molecular Function: methyltransferase activity (GO:0008168))
RBG1351_33_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(10325..11218)
DNA (894bp) protein (298aa)
UbiA prenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] Tax=RBG_13_Chloroflexi_51_52_curated
UbiA prenyltransferase
UbiA prenyltransferase
UbiA prenyltransferase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFB0_SYNFM (db=UNIREF evalue=7.5e-89 bit_score=332.8 identity=52.8 coverage=99.32885906040269)
RBG1351_33_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(11272..11760)
DNA (489bp) protein (163aa)
Marine sediment metagenome DNA, contig: S03H2_S15143 Tax=RBG_13_Chloroflexi_51_52_curated
11272..11760 - ( gc_cont=0.476)
RBG1351_33_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(12079..12504)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRA3_DEHSB (db=UNIREF evalue=8.1e-09 bit_score=65.9 identity=42.6 coverage=65.49295774647888)
coiled-coil (db=Coil db_id=coil from=85 to=120 evalue=NA)
RBG1351_33_16
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(12664..14397)
DNA (1734bp) protein (578aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZV9_DEHLB (db=UNIREF evalue=1.4e-78 bit_score=299.7 identity=37.4 coverage=93.25259515570934)
coiled-coil (db=Coil db_id=coil from=467 to=488 evalue=NA)
RBG1351_33_17
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

14731..15024
DNA (294bp) protein (98aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
transcriptional regulator
Transcriptional regulator, TrmB n=5 Tax=Dehalococcoides mccartyi RepID=A5FQZ4_DEHSB (db=UNIREF evalue=1.5e-25 bit_score=120.9 identity=56.7 coverage=97.95918367346938)
(db=HMMPfam db_id=PF08279 from=16 to=60 evalue=3.4e-05 interpro_id=IPR013196 interpro_description=Helix-turn-helix, type 11)
RBG1351_33_18
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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15183..16310
DNA (1128bp) protein (376aa)
rlmN; ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=RBG_13_Chloroflexi_51_52_curated
Ribosomal RNA large subunit methyltransferase N n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TN06_9CHLR (db=UNIREF evalue=1.1e-84 bit_score=319.3 identity=48.8 coverage=93.61702127659575)
rlmN; ribosomal RNA large subunit methyltransferase N
rlmN; ribosomal RNA large subunit methyltransferase N
RBG1351_33_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

16313..17266
DNA (954bp) protein (318aa)
integral membrane protein TerC; K05794 tellurite resistance protein TerC Tax=RBG_13_Chloroflexi_51_52_curated
TerC family membrane protein
TerC family membrane protein
Integral membrane protein TerC n=5 Tax=Dehalococcoides mccartyi RepID=A5FSS9_DEHSB (db=UNIREF evalue=7.9e-97 bit_score=359.4 identity=57.3 coverage=94.0251572327044)
RBG1351_33_20
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

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comp(17362..17667)
DNA (306bp) protein (102aa)
hypothetical protein Tax=RBG_13_Chloroflexi_52_12_curated
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRI2_DEHSB (db=UNIREF evalue=1.4e-23 bit_score=114.4 identity=49.5 coverage=98.0392156862745)
Displaying 20 items

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