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RBG1351_34

Alias: RBG_1351c3_34

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_34_1
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)
exonuclease SbcC; K03546 exonuclease SbcC Tax=RBG_16_Chloroflexi_56_11_curated
SMC domain-containing protein
SMC domain protein n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B623_HERA2 (db=UNIREF evalue=1.1e-19 bit_score=100.9 identity=68.3 coverage=93.93939393939394)
STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 (SMC5, SMC6) (db=HMMPanther db_id=PTHR19306 from=4 to=63 evalue=0.00011)
RBG1351_34_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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512..1633
DNA (1122bp) protein (374aa)
ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_13_Chloroflexi_51_36_curated
D-alanine-D-alanine ligase
D-alanine-D-alanine ligase n=1 Tax=Ignavibacterium album JCM 16511 RepID=I0AM02_IGNAJ (db=UNIREF evalue=8.0e-40 bit_score=170.2 identity=38.1 coverage=69.5187165775401)
(db=HMMPfam db_id=PF07478 from=150 to=316 evalue=2.8e-19 interpro_id=IPR011095 interpro_description=D-alanine--D-alanine ligase, C-terminal GO=Molecular Function: D-alanine-D-alanine ligase activity (GO:0008716))
RBG1351_34_3
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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1730..2371
DNA (642bp) protein (214aa)
abortive infection protein Tax=RBG_13_Chloroflexi_51_18_curated
abortive infection protein
Abortive infection protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UZP8_ROSS1 (db=UNIREF evalue=4.3e-22 bit_score=110.5 identity=33.8 coverage=90.18691588785047)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=64)
RBG1351_34_4
unknown

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2513..2608
DNA (96bp) protein (32aa)
2513..2608 + ( gc_cont=0.385)
RBG1351_34_5
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

2605..3312
DNA (708bp) protein (236aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_18_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AW72_SYNWW (db=UNIREF evalue=1.4e-26 bit_score=125.6 identity=35.1 coverage=96.1864406779661)
seg (db=Seg db_id=seg from=18 to=60)
RBG1351_34_6
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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3650..4516
DNA (867bp) protein (289aa)
id=2739409 Tax=RBG_13_Chloroflexi_51_18_curated
seg (db=Seg db_id=seg from=6 to=17)
seg (db=Seg db_id=seg from=238 to=255)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
RBG1351_34_7
unknown

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4568..4861
DNA (294bp) protein (98aa)
4568..4861 + ( gc_cont=0.320)
RBG1351_34_8
unknown

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4891..5901
DNA (1011bp) protein (337aa)
4891..5901 + ( gc_cont=0.354)
RBG1351_34_9
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5930..6976)
DNA (1047bp) protein (349aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RBG_16_Chloroflexi_50_11_curated
excinuclease ABC subunit A
Excinuclease ABC, A subunit n=5 Tax=Dehalococcoides mccartyi RepID=Q3Z909_DEHE1 (db=UNIREF evalue=2.5e-152 bit_score=543.9 identity=76.1 coverage=99.14040114613181)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=237 to=251 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
RBG1351_34_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6999..8756)
DNA (1758bp) protein (586aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RBG_16_Chloroflexi_50_11_curated
excinuclease ABC subunit A
excinuclease ABC subunit A
Excinuclease ABC, A subunit n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0H1_DEHLB (db=UNIREF evalue=6.1e-220 bit_score=769.2 identity=69.5 coverage=93.1740614334471)
RBG1351_34_11
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

9094..10353
DNA (1260bp) protein (420aa)
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41) Tax=RBG_16_Chloroflexi_50_11_curated
3-oxoacyl-(acyl-carrier-protein) synthase 2 (EC:2.3.1.179)
3-oxoacyl-(acyl-carrier-protein) synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=11 Tax=Geobacillus RepID=F8CZP8_BACTR (db=UNIREF evalue=1.8e-125 bit_score=454.9 identity=54.0 coverage=97.38095238095238)
RBG1351_34_12
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

10409..10690
DNA (282bp) protein (94aa)
mismatch repair ATPase; K07456 DNA mismatch repair protein MutS2 Tax=RBG_16_Chloroflexi_50_11_curated
mismatch repair ATPase
MutS2 protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=MUTS2_PELTS (db=UNIREF evalue=1.3e-15 bit_score=87.8 identity=55.7 coverage=82.97872340425532)
no description (db=HMMSmart db_id=SM00463 from=13 to=91 evalue=1.9e-13 interpro_id=IPR002625 interpro_description=Smr protein/MutS2 C-terminal)
RBG1351_34_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12082..12282)
DNA (201bp) protein (67aa)
dmpI-2; putative 4-oxalocrotonate tautomerase (EC:5.3.2.-); K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=RBG_16_Chloroflexi_56_11_curated
putative 4-oxalocrotonate tautomerase
Putative 4-oxalocrotonate tautomerase n=1 Tax=Methanocella paludicola SANAE RepID=D1YXM8_METPS (db=UNIREF evalue=3.8e-09 bit_score=65.9 identity=50.8 coverage=86.56716417910447)
no description (db=Gene3D db_id=G3DSA:3.30.429.10 from=3 to=59 evalue=0.00064 interpro_id=IPR014347 interpro_description=Tautomerase)
RBG1351_34_14
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(12789..13220)
DNA (432bp) protein (144aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Acetobacterium woodii DSM 1030 RepID=H6LJ67_ACEWD (db=UNIREF evalue=1.1e-32 bit_score=145.2 identity=50.7 coverage=93.05555555555556)
RBG1351_34_15

Not on your lists

13437..14045
DNA (609bp) protein (203aa)
Marine sediment metagenome DNA, contig: S03H2_L03259 {ECO:0000313|EMBL:GAH39758.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13437..14045 + ( gc_cont=0.320)
RBG1351_34_16
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

14131..15009
DNA (879bp) protein (293aa)
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RBG_13_Chloroflexi_57_8_curated
ffh; signal recognition particle protein
ffh; signal recognition particle protein
Signal recognition particle protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YI83_THEYD (db=UNIREF evalue=2.1e-83 bit_score=314.7 identity=60.9 coverage=90.44368600682594)
RBG1351_34_17
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

14978..15478
DNA (501bp) protein (167aa)
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Chloroflexi_56_11_curated
signal recognition particle protein
Signal recognition particle protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFI8_THET1 (db=UNIREF evalue=1.8e-44 bit_score=184.5 identity=54.9 coverage=97.0059880239521)
SIGNAL RECOGNITION PARTICLE PROTEIN (db=HMMPanther db_id=PTHR11564:SF7 from=1 to=163 evalue=1.3e-69 interpro_id=IPR004780 interpro_description=Signal recognition particle, SRP GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))
RBG1351_34_18
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(15485..16735)
DNA (1251bp) protein (417aa)
multidrug resistance protein; K08217 MFS transporter, DHA3 family, macrolide efflux protein Tax=RBG_16_Chloroflexi_56_11_curated
multidrug resistance protein
multidrug resistance protein
Multidrug resistance protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1V3_ANATU (db=UNIREF evalue=1.2e-92 bit_score=345.9 identity=45.1 coverage=96.1630695443645)
RBG1351_34_19
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(16793..17422)
DNA (630bp) protein (210aa)
transcriptional regulator Tax=RBG_16_Chloroflexi_56_11_curated
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKZ2_9BRAD (db=UNIREF evalue=1.8e-20 bit_score=105.1 identity=30.6 coverage=91.9047619047619)
transcriptional regulator
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=29 to=60 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site)
Displaying 19 items

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