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RBG1351_35

Alias: RBG_1351c3_35

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG1351_35_1
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..230)
DNA (228bp) protein (76aa)
CO dehydrogenase/acetyl-CoA synthase subunit delta; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-] Tax=RBG_13_Chloroflexi_51_18_curated
Putative corrinoid/iron-sulfur protein, large subunit n=1 Tax=delta proteobacterium NaphS2 RepID=D8F945_9DELT (db=UNIREF evalue=2.9e-13 bit_score=79.7 identity=52.1 coverage=92.10526315789474)
cdhE; acetyl-CoA decarbonylase/synthase complex subunit gamma (EC:1.2.99.2)
(db=HMMPfam db_id=PF03599 from=10 to=74 evalue=8.8e-13 interpro_id=IPR016041 interpro_description=CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel)
RBG1351_35_2
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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comp(208..726)
DNA (519bp) protein (173aa)
CO dehydrogenase/acetyl-CoA synthase subunit delta; K00197 acetyl-CoA decarbonylase/synthase complex subunit gamma [EC:2.1.1.-] Tax=RBG_13_Chloroflexi_51_18_curated
CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) (EC:2.1.1.-)
CO dehydrogenase/acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C085_9DELT (db=UNIREF evalue=5.2e-50 bit_score=203.0 identity=59.5 coverage=95.37572254335261)
seg (db=Seg db_id=seg from=140 to=152)
RBG1351_35_3
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

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comp(803..3010)
DNA (2208bp) protein (736aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; K14138 carbon monoxide dehydrogenase / acetyl-CoA synthase subunit alpha [EC:1.2.7.4 1.2.99.2 2.3.1.169] Tax=RBG_13_Chlorofle
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta
Acetyl-CoA decarbonylase/synthase alpha subunit / acetyl-CoA decarbonylase/synthase beta subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLE1_SYNFM (db=UNIREF evalue=0.0 bit_score=1085.1 identity=69.0 coverage=99.59239130434783)
RBG1351_35_4
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3047..4609)
DNA (1563bp) protein (521aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2); K00198 carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2] Tax=RBG_13_Chloroflexi_51_18_curated
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NIB0_DESAR (db=UNIREF evalue=8.2e-208 bit_score=728.8 identity=69.0 coverage=99.04030710172745)
RBG1351_35_5
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(5010..5975)
DNA (966bp) protein (322aa)
cdhD; carbon-monoxide dehydrogenase delta subunit; K00194 acetyl-CoA decarbonylase/synthase complex subunit delta Tax=RBG_13_Chloroflexi_51_52_curated
cdhD; acetyl-CoA decarbonylase / synthase complex subunit delta (EC:2.1.1.245)
cdhD; acetyl-CoA decarbonylase / synthase complex subunit delta (EC:2.1.1.245)
Carbon-monoxide dehydrogenase delta subunit n=1 Tax=Dehalococcoides sp. VS RepID=D2BHF4_DEHSV (db=UNIREF evalue=8.5e-123 bit_score=445.7 identity=65.5 coverage=96.8944099378882)
RBG1351_35_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(5989..6207)
DNA (219bp) protein (73aa)
Marine sediment metagenome DNA, contig: S03H2_L00116 Tax=RBG_13_Chloroflexi_51_52_curated
5989..6207 - ( gc_cont=0.562)
RBG1351_35_7
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(6242..7129)
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=RBG_13_Chlorof
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=D6Z1V7_DESAT (db=UNIREF evalue=2.5e-113 bit_score=414.1 identity=70.1 coverage=98.98648648648648)
RBG1351_35_8
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(7170..7262)
DNA (93bp) protein (31aa)
Tax=RBG_13_Chloroflexi_51_52_curated
seg (db=Seg db_id=seg from=15 to=26)
RBG1351_35_9
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(7272..8078)
DNA (807bp) protein (269aa)
carbon monoxide dehydrogenase nickel-insertion accessory protein; K07321 CO dehydrogenase maturation factor Tax=RBG_13_Chloroflexi_51_52_curated
carbon monoxide dehydrogenase
carbon monoxide dehydrogenase
CO dehydrogenase maturation factor-like protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRF2_DEHSB (db=UNIREF evalue=5.2e-81 bit_score=306.6 identity=57.7 coverage=95.16728624535315)
RBG1351_35_10
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(8182..9945)
DNA (1764bp) protein (588aa)
formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_13_Chloroflexi_51_52_curated
Formate--tetrahydrofolate ligase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAW7_9DELT (db=UNIREF evalue=7.6e-287 bit_score=991.5 identity=82.3 coverage=99.65986394557824)
formate--tetrahydrofolate ligase
formate--tetrahydrofolate ligase
RBG1351_35_11
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(10102..10911)
DNA (810bp) protein (270aa)
cobyrinic acid ac-diamide synthase; K07321 CO dehydrogenase maturation factor Tax=RBG_13_Chloroflexi_51_52_curated
Uncharacterized ATP-binding protein MJ0823 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YCD1_9DELT (db=UNIREF evalue=3.3e-75 bit_score=287.3 identity=57.1 coverage=91.11111111111111)
cobyrinic acid ac-diamide synthase
seg (db=Seg db_id=seg from=120 to=132)
RBG1351_35_12
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

11153..11854
DNA (702bp) protein (234aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Conserved uncharacterized metal-binding protein n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A019_PELCD (db=UNIREF evalue=3.6e-54 bit_score=217.2 identity=48.9 coverage=93.58974358974359)
(db=HMMPfam db_id=PF08901 from=38 to=203 evalue=7.8e-51 interpro_id=IPR014997 interpro_description=Protein of unknown function DUF1847)
RBG1351_35_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

11876..12181
DNA (306bp) protein (102aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I6C8_DESAP (db=UNIREF evalue=1.4e-26 bit_score=124.4 identity=62.0 coverage=96.07843137254902)
MTH1187/YkoF-like (db=superfamily db_id=SSF89957 from=1 to=101 evalue=1.5e-32 interpro_id=IPR016198 interpro_description=Thiamin/hydroxymethyl pyrimidine-binding protein-like, putative)
RBG1351_35_14
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

12187..13011
DNA (825bp) protein (275aa)
hypothetical protein Tax=RBG_13_Chloroflexi_51_52_curated
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z208_9EURY (db=UNIREF evalue=9.0e-73 bit_score=279.3 identity=49.8 coverage=97.45454545454545)
Protein of unknown function DUF81
seg (db=Seg db_id=seg from=187 to=205)
RBG1351_35_15
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

13025..13864
DNA (840bp) protein (280aa)
metal-dependent hydrolase, beta-lactamase superfamily II Tax=RBG_13_Chloroflexi_51_52_curated
metal-dependent hydrolase, beta-lactamase superfamily II
Beta-lactamase domain protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I199_9FIRM (db=UNIREF evalue=1.2e-72 bit_score=278.9 identity=52.5 coverage=96.78571428571429)
no description (db=HMMSmart db_id=SM00849 from=21 to=247 evalue=0.0061 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
RBG1351_35_16
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(13873..15270)
DNA (1398bp) protein (466aa)
arabinose efflux permease family protein
Arabinose efflux permease family protein {ECO:0000313|EMBL:AFM21863.1}; Flags: Precursor;; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" s
Arabinose efflux permease family protein n=1 Tax=Anaerobaculum mobile DSM 13181 RepID=I4BX56_9BACT (db=UNIREF evalue=1.7e-124 bit_score=451.8 identity=49.0 coverage=92.91845493562232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=238)
RBG1351_35_17
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15811..16113)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB34992.1}; TaxID=1262915 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobac
15811..16113 - ( gc_cont=0.574)
RBG1351_35_18
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

16638..16820
DNA (183bp) protein (61aa)
thiamin biosynthesis protein ThiC Tax=RBG_13_Chloroflexi_51_18_curated
thiC; thiamine biosynthesis protein ThiC
Phosphomethylpyrimidine synthase n=5 Tax=Dehalococcoides mccartyi RepID=THIC_DEHSC (db=UNIREF evalue=9.8e-12 bit_score=74.3 identity=53.3 coverage=96.72131147540983)
(db=HMMPfam db_id=PF01964 from=1 to=51 evalue=2.4e-13 interpro_id=IPR002817 interpro_description=Thiamine biosynthesis protein ThiC GO=Biological Process: thiamine biosynthetic process (GO:0009228))
Displaying 18 items

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