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RBG9_4

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG9_4_1
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists


3..686
DNA (684bp) protein (228aa)
recA; protein RecA; K03553 recombination protein RecA Tax=RBG_16_Chloroflexi_48_8_curated
Protein RecA n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZ43_ANATU (db=UNIREF evalue=9.4e-92 bit_score=342.0 identity=74.5 coverage=98.68421052631578)
recA; protein RecA
recA; protein RecA
RBG9_4_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

683..868
DNA (186bp) protein (62aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
683..868 + ( gc_cont=0.532)
RBG9_4_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

999..1649
DNA (651bp) protein (217aa)
recX; regulatory protein RecX; K03565 regulatory protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Regulatory protein RecX n=1 Tax=uncultured prokaryote RepID=H5SKR7_9ZZZZ (db=UNIREF evalue=3.4e-43 bit_score=180.6 identity=48.5 coverage=91.70506912442397)
recX; regulatory protein RecX
seg (db=Seg db_id=seg from=156 to=167)
RBG9_4_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

1646..3175
DNA (1530bp) protein (510aa)
hypothetical protein; K06950 uncharacterized protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
hypothetical protein
Ribonuclease Y n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5C2_ANATU (db=UNIREF evalue=3.7e-197 bit_score=693.3 identity=68.0 coverage=99.41176470588235)
RBG9_4_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3202..3795)
DNA (594bp) protein (198aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
3202..3795 - ( gc_cont=0.638)
RBG9_4_6
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3767..4162)
DNA (396bp) protein (132aa)
response regulator; K02483 two-component system, OmpR family, response regulator Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Response regulator receiver protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SBB3_9CHLR (db=UNIREF evalue=1.5e-20 bit_score=104.8 identity=42.5 coverage=94.6969696969697)
response regulator
SENSORY TRANSDUCTION HISTIDINE KINASE (DHKB) (db=HMMPanther db_id=PTHR23283:SF47 from=7 to=121 evalue=1.0e-21)
RBG9_4_7
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4759..6036)
DNA (1278bp) protein (426aa)
pdhC; putative pyruvate dehydrogenase E2 component (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_cur
pdhC; putative pyruvate dehydrogenase E2 component (EC:2.3.1.12)
pdhC; putative pyruvate dehydrogenase E2 component (EC:2.3.1.12)
Putative pyruvate dehydrogenase E2 component n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4U2_ANATU (db=UNIREF evalue=9.0e-112 bit_score=409.5 identity=49.9 coverage=96.71361502347418)
RBG9_4_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(6036..7007)
DNA (972bp) protein (324aa)
pdhB; putative pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
pdhB; putative pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
pdhB; putative pyruvate dehydrogenase E1 component beta subunit (EC:1.2.4.1)
Putative pyruvate dehydrogenase E1 component beta subunit n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4U1_ANATU (db=UNIREF evalue=2.0e-148 bit_score=530.8 identity=80.2 coverage=99.38271604938271)
RBG9_4_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(7012..7974)
DNA (963bp) protein (321aa)
pdhA; putative pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
pdhA; putative pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
pdhA; putative pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Putative pyruvate dehydrogenase E1 component alpha subunit n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4U0_ANATU (db=UNIREF evalue=3.4e-124 bit_score=450.3 identity=66.4 coverage=98.4423676012461)
RBG9_4_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(8345..9685)
DNA (1341bp) protein (447aa)
seg 115..141 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
seg (db=Seg db_id=seg from=115 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
RBG9_4_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

9912..10202
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
9912..10202 + ( gc_cont=0.619)
RBG9_4_12
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10139..11512)
DNA (1374bp) protein (458aa)
trpB; tryptophan synthase beta chain (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Chloroflexi_48_8_curated
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain 1 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MYH4_ANATU (db=UNIREF evalue=5.4e-179 bit_score=632.9 identity=67.2 coverage=99.56331877729258)
RBG9_4_13
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12165..13343)
DNA (1179bp) protein (393aa)
UBA/THIF-type NAD/FAD binding domain-containing protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
UBA/THIF-type NAD/FAD binding domain-containing protein
UBA/THIF-type NAD/FAD binding domain-containing protein
UBA/THIF-type NAD/FAD binding fold n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AY17_RUBXD (db=UNIREF evalue=3.4e-142 bit_score=510.4 identity=64.7 coverage=97.20101781170484)
RBG9_4_14
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13442..13888)
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MY69_ANATU (db=UNIREF evalue=2.5e-21 bit_score=107.5 identity=45.1 coverage=86.57718120805369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
RBG9_4_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(13895..14662)
DNA (768bp) protein (256aa)
hypothetical protein Tax=RBG_13_Chloroflexi_68_17_curated
hypothetical protein
Hypothetical membrane protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MY70_ANATU (db=UNIREF evalue=1.0e-38 bit_score=166.0 identity=53.5 coverage=60.15625)
transmembrane_regions (db=TMHMM db_id=tmhmm from=206 to=228)
RBG9_4_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14659..15111)
DNA (453bp) protein (151aa)
Mov34/MPN/PAD-1 family protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein n=2 Tax=Rhodothermus marinus RepID=D0MJA6_RHOM4 (db=UNIREF evalue=1.3e-25 bit_score=121.7 identity=41.5 coverage=95.36423841059603)
seg (db=Seg db_id=seg from=65 to=76)
RBG9_4_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(15108..16115)
DNA (1008bp) protein (336aa)
cysteine synthase B (EC:2.5.1.47); K12339 cysteine synthase B [EC:2.5.1.47] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
cysteine synthase B (EC:2.5.1.47)
cysteine synthase B (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1Q0_THERP (db=UNIREF evalue=2.1e-92 bit_score=344.7 identity=55.5 coverage=90.77380952380952)
RBG9_4_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

16473..17303
DNA (831bp) protein (277aa)
cell wall hydrolase/autolysin family protein; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
cell wall hydrolase/autolysin family protein
Cell wall hydrolase/autolysin family protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N290_ANATU (db=UNIREF evalue=3.7e-58 bit_score=230.7 identity=47.5 coverage=93.14079422382672)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
RBG9_4_19
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

17300..18310
DNA (1011bp) protein (337aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N291_ANATU (db=UNIREF evalue=2.6e-82 bit_score=311.2 identity=51.4 coverage=93.17507418397626)
hypothetical protein
hypothetical protein
RBG9_4_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

18400..18852
DNA (453bp) protein (151aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N2A9_ANATU (db=UNIREF evalue=2.4e-43 bit_score=180.6 identity=57.3 coverage=98.67549668874173)
seg (db=Seg db_id=seg from=25 to=38)
RBG9_4_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

18953..19792
DNA (840bp) protein (280aa)
putative thioredoxin; K05838 putative thioredoxin Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
putative thioredoxin
Putative thioredoxin n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N2S7_ANATU (db=UNIREF evalue=3.3e-70 bit_score=270.8 identity=51.1 coverage=98.92857142857143)
seg (db=Seg db_id=seg from=253 to=266)
RBG9_4_22
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19809..20432)
DNA (624bp) protein (208aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02CZ5_SOLUE (db=UNIREF evalue=2.0e-24 bit_score=118.2 identity=39.8 coverage=74.51923076923077)
RBG9_4_23
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(20531..21475)
DNA (945bp) protein (315aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1F2_ANATU (db=UNIREF evalue=1.8e-61 bit_score=241.9 identity=42.6 coverage=96.82539682539682)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
RBG9_4_24
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(21962..23452)
DNA (1491bp) protein (497aa)
Putative uncharacterized protein Tax=RBG_16_Chloroflexi_54_11_curated
Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB4_9ACTN (db=UNIREF evalue=1.4e-44 bit_score=186.4 identity=34.0 coverage=78.26961770623743)
hypothetical protein
seg (db=Seg db_id=seg from=328 to=339)
RBG9_4_25
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(23657..24748)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein Tax=RBG_16_Chloroflexi_54_11_curated
Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAB4_9ACTN (db=UNIREF evalue=1.1e-20 bit_score=106.7 identity=35.1 coverage=60.16483516483516)
RBG9_4_26
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

comp(24857..25081)
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=54 to=74)
RBG9_4_27
RBG9, RBG9, RBG9, RBG9, Chloroflexi, Bacteria

Not on your lists

comp(25097..25666)
DNA (570bp) protein (190aa)
25097..25666 - ( gc_cont=0.644)
RBG9_4_28
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

25983..26291
DNA (309bp) protein (103aa)
secA; putative preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
secA; putative preprotein translocase SecA subunit
Protein translocase subunit SecA n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8MZK7_ANATU (db=UNIREF evalue=1.8e-18 bit_score=97.4 identity=51.5 coverage=95.14563106796116)
seg (db=Seg db_id=seg from=94 to=102)
RBG9_4_29
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

26340..27392
DNA (1053bp) protein (351aa)
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
add; adenosine deaminase (EC:3.5.4.4)
add; adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1I6_ANATU (db=UNIREF evalue=3.2e-83 bit_score=314.3 identity=47.6 coverage=93.16239316239316)
RBG9_4_30
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

27745..28635
DNA (891bp) protein (297aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I3V4_CALAS (db=UNIREF evalue=8.3e-48 bit_score=196.4 identity=37.2 coverage=93.26599326599326)
seg (db=Seg db_id=seg from=86 to=97)
Displaying items 1-30 of 110 in total

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