ggKbase home page

CHLO_5_367

Alias: 16ftChloro_3076

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_5_367_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3..1106)
DNA (1104bp) protein (368aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
3..1106 - ( gc_cont=0.747)
CHLO_5_367_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1219..2805
DNA (1587bp) protein (529aa)
id=14630336 Tax=RBG_16_RIF_CHLX_72_14_curated
1219..2805 + ( gc_cont=0.725)
CHLO_5_367_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

3286..4488
DNA (1203bp) protein (401aa)
id=4803547 Tax=RBG_16_RIF_CHLX_72_14_curated
3286..4488 + ( gc_cont=0.736)
CHLO_5_367_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

4485..5222
DNA (738bp) protein (246aa)
DegS sensor signal transduction histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] Tax=RBG_16_RIF_CHLX_72_14_curated
histidine kinase
DegS sensor signal transduction histidine kinase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GFC2_9FIRM (db=UNIREF evalue=2.7e-16 bit_score=91.7 identity=38.7 coverage=57.72357723577236)
CHLO_5_367_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5219..5599
DNA (381bp) protein (127aa)
DegS sensor signal transduction histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] Tax=RBG_16_RIF_CHLX_72_14_curated
Histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGL2_9CHLR (db=UNIREF evalue=3.4e-18 bit_score=97.1 identity=50.9 coverage=81.88976377952756)
histidine kinase
CHLO_5_367_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5596..5997
DNA (402bp) protein (134aa)
LuxR family transcriptional regulator Tax=RBG_16_RIF_CHLX_72_14_curated
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Two component transcriptional regulator, LuxR family n=2 Tax=Marinithermus hydrothermalis DSM 14884 RepID=F2NPS0_MARHT (db=UNIREF evalue=4.1e-14 bit_score=83.6 identity=52.6 coverage=55.970149253731336)
CHLO_5_367_7
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

5997..6338
DNA (342bp) protein (114aa)
two component transcriptional regulator, LuxR family Tax=RBG_16_RIF_CHLX_72_14_curated
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C482_SPHTD (db=UNIREF evalue=3.3e-33 bit_score=146.7 identity=61.6 coverage=97.36842105263158)
CHLO_5_367_8
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

6376..7539
DNA (1164bp) protein (388aa)
histidine kinase; K07777 two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3] Tax=RBG_16_RIF_CHLX_72_14_curated
histidine kinase
Histidine kinase dimerisation and phosphoacceptor region n=2 Tax=Chloroflexus RepID=A9W9P5_CHLAA (db=UNIREF evalue=7.1e-35 bit_score=154.1 identity=30.2 coverage=85.82474226804123)
CHLO_5_367_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7876..8046
DNA (171bp) protein (57aa)
Flp; flp pilus assembly protein, pilin Flp, pilin Flp; K02651 pilus assembly protein Flp/PilA Tax=RBG_16_RIF_CHLX_72_14_curated
7876..8046 + ( gc_cont=0.626)
CHLO_5_367_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

8234..8398
DNA (165bp) protein (55aa)
Flp/Fap pilin component Tax=RBG_16_RIF_CHLX_72_14_curated
8234..8398 + ( gc_cont=0.582)
CHLO_5_367_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

8529..8831
DNA (303bp) protein (101aa)
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA Tax=RBG_16_RIF_CHLX_72_14_curated
8529..8831 + ( gc_cont=0.644)
CHLO_5_367_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

9079..9984
DNA (906bp) protein (302aa)
Flp pilus assembly CpaB; K02279 pilus assembly protein CpaB Tax=RBG_16_RIF_CHLX_72_14_curated
9079..9984 + ( gc_cont=0.681)
CHLO_5_367_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

10117..11385
DNA (1269bp) protein (423aa)
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=RBG_16_RIF_CHLX_72_14_curated
response regulator receiver protein
response regulator receiver protein
Response regulator receiver protein n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B0M5_HERA2 (db=UNIREF evalue=1.1e-97 bit_score=362.8 identity=48.6 coverage=96.45390070921985)
CHLO_5_367_14
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

11433..12842
DNA (1410bp) protein (470aa)
type II secretion system protein E; K02283 pilus assembly protein CpaF Tax=RBG_16_RIF_CHLX_72_14_curated
type II secretion system protein E
type II secretion system protein E
Type II secretion system protein E n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C140_SPHTD (db=UNIREF evalue=8.5e-184 bit_score=649.0 identity=67.8 coverage=99.57446808510639)
CHLO_5_367_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

12861..13871
DNA (1011bp) protein (337aa)
type II secretion system protein F Tax=RBG_16_RIF_CHLX_72_14_curated
type II secretion system protein F
Type II secretion system protein F n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LRU9_9THEO (db=UNIREF evalue=1.5e-60 bit_score=239.2 identity=41.9 coverage=93.76854599406528)
CHLO_5_367_16
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

13875..14807
DNA (933bp) protein (311aa)
type II secretion system protein; K12511 tight adherence protein C Tax=RBG_16_RIF_CHLX_72_14_curated
type II secretion system protein
Type II secretion system protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C142_SPHTD (db=UNIREF evalue=4.2e-70 bit_score=270.8 identity=47.4 coverage=95.17684887459808)
CHLO_5_367_17
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

14815..15204
DNA (390bp) protein (130aa)
hypothetical protein; K09005 hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NJV1_ROSCS (db=UNIREF evalue=1.3e-17 bit_score=95.1 identity=46.7 coverage=86.15384615384616)
CHLO_5_367_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

15302..16186
DNA (885bp) protein (295aa)
id=14629634 Tax=RBG_16_RIF_CHLX_72_14_curated
15302..16186 + ( gc_cont=0.719)
CHLO_5_367_19
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16194..16868
DNA (675bp) protein (225aa)
competence protein ComF Tax=RBG_16_RIF_CHLX_72_14_curated
competence protein ComF
Competence protein ComF, putative n=1 Tax=Deinococcus radiodurans R1 RepID=Q9RUJ7_DEIRA (db=UNIREF evalue=1.8e-30 bit_score=138.7 identity=40.4 coverage=91.55555555555556)
CHLO_5_367_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

17035..17631
DNA (597bp) protein (199aa)
30S ribosomal protein S30P;sigma 54 modulation protein; K05808 putative sigma-54 modulation protein Tax=RBG_16_RIF_CHLX_72_14_curated
SSU ribosomal protein S30P;sigma 54 modulation protein n=1 Tax=Acetohalobium arabaticum DSM 5501 RepID=D9QU31_ACEAZ (db=UNIREF evalue=4.5e-33 bit_score=147.1 identity=41.2 coverage=91.4572864321608)
30S ribosomal protein S30P;sigma 54 modulation protein
CHLO_5_367_21
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17644..18312)
DNA (669bp) protein (223aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens DD2 RepID=H6RJZ0_BLASD (db=UNIREF evalue=5.4e-19 bit_score=100.5 identity=41.3 coverage=77.13004484304933)
CHLO_5_367_22
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

18360..19322
DNA (963bp) protein (321aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] Tax=RBG_16_RIF_CHLX_72_14_curated
nfo; putative endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Methanoculleus marisnigri JR1 RepID=END4_METMJ (db=UNIREF evalue=1.4e-49 bit_score=202.6 identity=38.1 coverage=86.6043613707165)
CHLO_5_367_23
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

19322..20623
DNA (1302bp) protein (434aa)
Putative uncharacterized protein Tax=RBG_16_RIF_CHLX_72_14_curated
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1K8J5_9MYCO (db=UNIREF evalue=1.6e-91 bit_score=342.4 identity=42.9 coverage=93.77880184331798)
CHLO_5_367_24
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

20599..20931
DNA (333bp) protein (111aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
20599..20931 + ( gc_cont=0.730)
CHLO_5_367_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21084..21647)
DNA (564bp) protein (188aa)
Helix-turn-helix domain-containing protein Tax=RBG_16_RIF_CHLX_72_14_curated
21084..21647 - ( gc_cont=0.730)
CHLO_5_367_26
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21871..23010)
DNA (1140bp) protein (380aa)
hypothetical protein; K07027 Tax=RBG_16_RIF_CHLX_72_14_curated
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IAX7_9CHLR (db=UNIREF evalue=3.5e-63 bit_score=248.1 identity=42.5 coverage=89.21052631578948)
hypothetical protein
CHLO_5_367_27
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23007..23714)
DNA (708bp) protein (236aa)
PHP domain-containing protein; K07053 Tax=RBG_16_RIF_CHLX_72_14_curated
PHP domain-containing protein
PHP domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEG6_THET1 (db=UNIREF evalue=4.0e-33 bit_score=147.5 identity=39.8 coverage=90.67796610169492)
CHLO_5_367_28
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23870..24868)
DNA (999bp) protein (333aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_16_RIF_CHLX_72_14_curated
rod shape-determining protein MreB
Rod shape-determining protein MreB n=2 Tax=Roseiflexus RepID=A5UQN1_ROSS1 (db=UNIREF evalue=1.3e-122 bit_score=445.3 identity=66.8 coverage=97.8978978978979)
CHLO_5_367_29
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(24957..26288)
DNA (1332bp) protein (444aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RBG_16_RIF_CHLX_72_14_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NY93_9GAMM (db=UNIREF evalue=1.6e-91 bit_score=342.4 identity=43.7 coverage=93.69369369369369)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
CHLO_5_367_30
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(26391..26819)
DNA (429bp) protein (143aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RBG_16_RIF_CHLX_72_14_curated
ATP synthase F1 subunit epsilon
ATP synthase epsilon chain n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8JZT6_DEHLB (db=UNIREF evalue=9.0e-36 bit_score=155.6 identity=55.2 coverage=97.2027972027972)
Displaying items 1-30 of 41 in total

View Taxonomy