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CHLO_5_1397

Alias: 16ftChloro_13695

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_5_1397_1
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(157..1122)
DNA (966bp) protein (322aa)
ISCc3, transposase OrfB Tax=RBG_16_Chloroflexi_56_11_curated
ISCc3, transposase
Transposase, orfB n=1 Tax=Nitratireductor indicus C115 RepID=K2NYM8_9RHIZ (db=UNIREF evalue=6.0e-72 bit_score=276.9 identity=42.5 coverage=95.65217391304348)
CHLO_5_1397_2
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1100..1783)
DNA (684bp) protein (228aa)
transposase Tax=RBG_16_Chloroflexi_56_11_curated
transposase
Transposase n=1 Tax=Hyphomicrobium sp. MC1 RepID=F8JDS1_HYPSM (db=UNIREF evalue=3.3e-24 bit_score=117.9 identity=52.7 coverage=47.80701754385965)
CHLO_5_1397_3
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1788..2156)
DNA (369bp) protein (123aa)
Marine sediment metagenome DNA, contig: S12H4_C00899 Tax=RBG_16_Chloroflexi_56_11_curated
1788..2156 - ( gc_cont=0.599)
CHLO_5_1397_4
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2104..2991)
DNA (888bp) protein (296aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Spirochaeta africana DSM 8902 RepID=H9UJF0_SPIAZ (db=UNIREF evalue=3.5e-10 bit_score=71.6 identity=26.0 coverage=81.08108108108108)
CHLO_5_1397_5
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3026..3262)
DNA (237bp) protein (79aa)
Marine sediment metagenome DNA, contig: S12H4_S20281 Tax=RBG_16_Chloroflexi_56_11_curated
3026..3262 - ( gc_cont=0.570)
CHLO_5_1397_6
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3262..3492)
DNA (231bp) protein (77aa)
Tax=RBG_16_Chloroflexi_56_11_curated
3262..3492 - ( gc_cont=0.532)
CHLO_5_1397_7
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3458..3943)
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S12H4_C03245 Tax=RBG_16_Chloroflexi_56_11_curated
3458..3943 - ( gc_cont=0.519)
CHLO_5_1397_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3982..4923)
DNA (942bp) protein (314aa)
integrase; K04763 integrase/recombinase XerD Tax=RBG_16_Chloroflexi_50_9_curated
Integrase family protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPW5_9FIRM (db=UNIREF evalue=2.1e-29 bit_score=135.6 identity=32.1 coverage=85.03184713375796)
tyrosine recombinase XerD subunit
CHLO_5_1397_9
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists


5466..5795
DNA (330bp) protein (110aa)
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=RBG_16_Chloroflexi_56_11_curated
30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Caloramator australicus RC3 RepID=I7LJY6_9CLOT (db=UNIREF evalue=8.8e-15 bit_score=85.5 identity=42.2 coverage=80.9090909090909)
CHLO_5_1397_10
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

5843..6250
DNA (408bp) protein (136aa)
single-stranded DNA-binding protein Tax=RBG_16_Chloroflexi_56_11_curated
single-stranded DNA-binding protein
Single-stranded DNA-binding protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FQL2_DEHSB (db=UNIREF evalue=1.0e-52 bit_score=211.8 identity=72.6 coverage=98.52941176470588)
CHLO_5_1397_11
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists


6287..6583
DNA (297bp) protein (99aa)
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RBG_16_Chloroflexi_56_11_curated
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 n=5 Tax=Dehalococcoides mccartyi RepID=RS18_DEHE1 (db=UNIREF evalue=3.7e-28 bit_score=129.8 identity=65.6 coverage=95.95959595959596)
CHLO_5_1397_12
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

7129..7410
DNA (282bp) protein (94aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
Putative membrane protein insertion efficiency factor n=2 Tax=Dehalococcoides mccartyi RepID=D2BI82_DEHSV (db=UNIREF evalue=6.4e-22 bit_score=109.0 identity=67.1 coverage=73.40425531914893)
hypothetical protein
CHLO_5_1397_13
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

7452..8618
DNA (1167bp) protein (389aa)
PQQ repeat-containing protein Tax=RBG_16_Chloroflexi_56_11_curated
PQQ repeat-containing protein
PQQ enzyme repeat domain protein n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z7P2_DEHE1 (db=UNIREF evalue=3.6e-71 bit_score=274.6 identity=39.9 coverage=90.74550128534705)
CHLO_5_1397_14
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

8630..9532
DNA (903bp) protein (301aa)
yidC; preprotein translocase YidC subunit; K03217 preprotein translocase subunit YidC Tax=RBG_16_Chloroflexi_56_11_curated
yidC; preprotein translocase subunit YidC
Preprotein translocase YidC subunit n=4 Tax=Dehalococcoides mccartyi RepID=D2BI80_DEHSV (db=UNIREF evalue=3.3e-64 bit_score=251.1 identity=50.2 coverage=78.07308970099668)
CHLO_5_1397_15
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

9558..10124
DNA (567bp) protein (189aa)
single-stranded nucleic acid binding protein Tax=RBG_16_Chloroflexi_56_11_curated
single-stranded nucleic acid binding R3H domain-containing protein
Single-stranded nucleic acid binding R3H domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FQM7_DEHSB (db=UNIREF evalue=4.8e-37 bit_score=160.2 identity=50.6 coverage=84.65608465608466)
CHLO_5_1397_16
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

10393..11541
DNA (1149bp) protein (383aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Chloroflexi_56_11_curated
isoleucyl-tRNA synthetase
Isoleucine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0C4_DEHLB (db=UNIREF evalue=3.4e-130 bit_score=470.7 identity=59.5 coverage=93.21148825065274)
CHLO_5_1397_17
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

11513..13426
DNA (1914bp) protein (638aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_16_Chloroflexi_56_11_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=5 Tax=Dehalococcoides mccartyi RepID=SYI_DEHSC (db=UNIREF evalue=7.4e-231 bit_score=805.8 identity=60.9 coverage=99.37304075235109)
CHLO_5_1397_18
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(13487..14617)
DNA (1131bp) protein (377aa)
serine protease, DegP-HtrA family Tax=RBG_16_Chloroflexi_56_11_curated
serine protease, DegP-HtrA family
serine protease, DegP-HtrA family
2-alkenal reductase n=3 Tax=Dehalococcoides mccartyi RepID=A5FQM5_DEHSB (db=UNIREF evalue=2.6e-82 bit_score=311.6 identity=45.7 coverage=98.6737400530504)
CHLO_5_1397_19
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14712..15959)
DNA (1248bp) protein (416aa)
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20); K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RBG_16_Chloroflexi_50_11_curated
pyridoxal-phosphate dependent TrpB-like protein (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K027_DEHLB (db=UNIREF evalue=5.6e-187 bit_score=659.4 identity=76.8 coverage=97.83653846153845)
Displaying 19 items

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