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CHLO_5_2181

Alias: 16ftChloro_33271

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_5_2181_1
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..791)
DNA (789bp) protein (263aa)
MiaB family RNA modification protein (EC:1.3.1.74); K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RBG_13_Chloroflexi_51_36_curated
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=uncultured prokaryote RepID=H5SLF2_9ZZZZ (db=UNIREF evalue=1.4e-63 bit_score=248.8 identity=48.1 coverage=97.33840304182509)
CHLO_5_2181_2
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(821..1390)
DNA (570bp) protein (190aa)
nitroreductase family protein Tax=RBG_13_Chloroflexi_51_36_curated
nitroreductase
Nitroreductase family protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TDK1_HELMI (db=UNIREF evalue=3.9e-63 bit_score=246.9 identity=64.2 coverage=97.89473684210527)
CHLO_5_2181_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(1432..2451)
DNA (1020bp) protein (340aa)
zinc-binding alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=RBG_13_Chloroflexi_51_36_curated
Alcohol dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SS33_9BACT (db=UNIREF evalue=9.1e-119 bit_score=432.6 identity=62.0 coverage=98.82352941176471)
zinc-binding alcohol dehydrogenase
zinc-binding alcohol dehydrogenase
CHLO_5_2181_4
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(2541..4115)
DNA (1575bp) protein (525aa)
kinase Tax=RBG_13_Chloroflexi_51_36_curated
kinase
kinase
Hypothetical kinase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ57_SYNAS (db=UNIREF evalue=2.1e-170 bit_score=604.7 identity=60.3 coverage=97.52380952380952)
CHLO_5_2181_5
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

4584..5048
DNA (465bp) protein (155aa)
rubrerythrin Tax=RBG_13_Chloroflexi_50_10_curated
rubrerythrin
Rubrerythrin n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUY1_SYNAS (db=UNIREF evalue=8.2e-51 bit_score=205.7 identity=65.0 coverage=91.61290322580645)
CHLO_5_2181_6

Not on your lists

5122..5496
DNA (375bp) protein (125aa)
Marine sediment metagenome DNA, contig: S06H3_S16582 {ECO:0000313|EMBL:GAI34132.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphodiesterase MJ0936 family
Phosphodiesterase MJ0936 family n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LIU8_9THEO (db=UNIREF evalue=3.1e-32 bit_score=143.7 identity=54.2 coverage=93.60000000000001)
CHLO_5_2181_7
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

5529..6107
DNA (579bp) protein (193aa)
NADPH-dependent FMN reductase Tax=RBG_13_Chloroflexi_51_36_curated
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY8_PELPD (db=UNIREF evalue=3.6e-48 bit_score=197.2 identity=50.8 coverage=94.81865284974094)
CHLO_5_2181_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(6108..6599)
DNA (492bp) protein (164aa)
flavodoxin Tax=RBG_13_Chloroflexi_50_10_curated
Flavodoxin n=1 Tax=uncultured bacterium (gcode 4) RepID=K2A3U2_9BACT (db=UNIREF evalue=1.0e-38 bit_score=165.6 identity=48.7 coverage=90.85365853658537)
flavodoxin
CHLO_5_2181_9
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists


comp(6730..7452)
DNA (723bp) protein (241aa)
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RBG_13_Chloroflexi_51_36_curated
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 n=5 Tax=Dehalococcoides mccartyi RepID=RL1_DEHSC (db=UNIREF evalue=2.8e-82 bit_score=310.8 identity=63.3 coverage=97.9253112033195)
CHLO_5_2181_10
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists


comp(7496..7705)
DNA (210bp) protein (70aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Chloroflexi_51_36_curated
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 n=86 Tax=Propionibacterium RepID=RL11_PROAC (db=UNIREF evalue=6.0e-17 bit_score=92.0 identity=61.8 coverage=95.71428571428572)
CHLO_5_2181_11
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists


comp(7711..7914)
DNA (204bp) protein (68aa)
Suspect SCG annotation. See neighboring gene [CHLO_5_2181_10].
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Chloroflexi_51_36_curated
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 n=5 Tax=Dehalococcoides mccartyi RepID=RL11_DEHSC (db=UNIREF evalue=5.8e-25 bit_score=118.6 identity=83.3 coverage=95.58823529411765)
CHLO_5_2181_12
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(7960..8487)
DNA (528bp) protein (176aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RBG_13_Chloroflexi_51_36_curated
NusG antitermination factor
Transcription antitermination protein nusG n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD65_THET1 (db=UNIREF evalue=1.0e-49 bit_score=202.2 identity=50.0 coverage=97.72727272727273)
CHLO_5_2181_13
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8493..8720)
DNA (228bp) protein (76aa)
SECE_SEC61G 22..50 Tax=RBG_13_Chloroflexi_51_36_curated
8493..8720 - ( gc_cont=0.504)
CHLO_5_2181_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(8923..10125)
DNA (1203bp) protein (401aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=RBG_13_Chloroflexi_51_36_curated
tuf; translation elongation factor Tu
Elongation factor Tu n=5 Tax=Dehalococcoides mccartyi RepID=EFTU_DEHE1 (db=UNIREF evalue=2.4e-179 bit_score=634.0 identity=74.6 coverage=99.50124688279301)
CHLO_5_2181_15
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists


10689..11525
DNA (837bp) protein (279aa)
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_13_Chloroflexi_51_36_curated
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 n=5 Tax=Dehalococcoides mccartyi RepID=RS2_DEHE1 (db=UNIREF evalue=7.5e-79 bit_score=299.7 identity=58.2 coverage=84.58781362007169)
CHLO_5_2181_16
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

11522..12031
DNA (510bp) protein (170aa)
translation elongation factor EFTs/EF1B dimerization; K02357 elongation factor Ts Tax=RBG_13_Chloroflexi_48_17_curated
translation elongation factor EFTs/EF1B dimerization
Elongation factor Ts n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K140_DEHLB (db=UNIREF evalue=1.1e-45 bit_score=188.7 identity=53.6 coverage=97.05882352941177)
CHLO_5_2181_17
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

12035..12592
DNA (558bp) protein (186aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_13_Chloroflexi_51_36_curated
ribosome recycling factor n=1 Tax=Bacillus sp. 10403023 RepID=UPI0002896A9E (db=UNIREF evalue=3.5e-48 bit_score=197.2 identity=48.6 coverage=98.9247311827957)
frr; ribosome recycling factor
CHLO_5_2181_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

12798..13634
DNA (837bp) protein (279aa)
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41); K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_13_Chloroflexi_51_36_curated
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=A5FS88_DEHSB (db=UNIREF evalue=2.8e-57 bit_score=228.0 identity=39.8 coverage=94.98207885304659)
CHLO_5_2181_19
unknown

Not on your lists

comp(13533..14039)
DNA (507bp) protein (169aa)
13533..14039 - ( gc_cont=0.531)
CHLO_5_2181_20
unknown

Not on your lists

comp(14169..14336)
DNA (168bp) protein (56aa)
14169..14336 - ( gc_cont=0.452)
CHLO_5_2181_21
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14368..14829
DNA (462bp) protein (154aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_13_Chloroflexi_51_36_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Dehalococcoides mccartyi RepID=A5FS87_DEHSB (db=UNIREF evalue=1.9e-39 bit_score=167.9 identity=60.3 coverage=87.66233766233766)
CHLO_5_2181_22
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14833..15108
DNA (276bp) protein (92aa)
putative membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_13_Chloroflexi_51_36_curated
membrane-associated zinc metalloprotease
Uncharacterized protein n=2 Tax=uncultured bacterium RepID=K2EYC5_9BACT (db=UNIREF evalue=1.7e-19 bit_score=100.9 identity=50.6 coverage=92.3913043478261)
Displaying 22 items

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