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CHLO_5_2199

Alias: 16ftChloro_33842

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_5_2199_1
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


136..447
DNA (312bp) protein (104aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_13_Chloroflexi_50_10_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=5 Tax=Dehalococcoides mccartyi RepID=RL24_DEHE1 (db=UNIREF evalue=1.5e-35 bit_score=154.5 identity=68.9 coverage=98.07692307692307)
CHLO_5_2199_2
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists


458..1006
DNA (549bp) protein (183aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZM4_THEOJ (db=UNIREF evalue=4.3e-67 bit_score=260.0 identity=68.7 coverage=97.26775956284153)
CHLO_5_2199_3
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists


1228..1620
DNA (393bp) protein (131aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=2 Tax=Roseiflexus RepID=RS8_ROSCS (db=UNIREF evalue=5.5e-40 bit_score=169.5 identity=63.1 coverage=97.70992366412213)
CHLO_5_2199_4
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


1643..2194
DNA (552bp) protein (184aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Chloroflexi_50_10_curated
50S ribosomal protein L6 n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RL6_DESRM (db=UNIREF evalue=1.8e-57 bit_score=228.0 identity=62.1 coverage=98.36956521739131)
rplF; 50S ribosomal protein L6
CHLO_5_2199_5
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


2579..3100
DNA (522bp) protein (174aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_13_Chloroflexi_50_10_curated
30S ribosomal protein S5
30S ribosomal protein S5 n=5 Tax=Dehalococcoides mccartyi RepID=RS5_DEHSC (db=UNIREF evalue=1.6e-39 bit_score=168.3 identity=48.6 coverage=94.82758620689656)
CHLO_5_2199_6
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists


3093..3287
DNA (195bp) protein (65aa)
LSU ribosomal protein L30P Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR (db=UNIREF evalue=3.4e-14 bit_score=82.8 identity=59.0 coverage=92.3076923076923)
LSU ribosomal protein L30P
CHLO_5_2199_7
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists


3274..3717
DNA (444bp) protein (148aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1A1_DEHLB (db=UNIREF evalue=1.7e-45 bit_score=188.0 identity=63.9 coverage=98.64864864864865)
CHLO_5_2199_8
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

3718..4017
DNA (300bp) protein (100aa)
Suspect SCG annotation. See neighboring gene [CHLO_5_2199_9].
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY n=5 Tax=Dehalococcoides mccartyi RepID=A5FRW4_DEHSB (db=UNIREF evalue=1.7e-33 bit_score=147.5 identity=76.8 coverage=94.0)
CHLO_5_2199_9
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists


3996..5033
DNA (1038bp) protein (346aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_13_Chloroflexi_48_17_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1A0_DEHLB (db=UNIREF evalue=1.0e-133 bit_score=482.3 identity=66.7 coverage=99.42196531791907)
CHLO_5_2199_10
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

5042..5704
DNA (663bp) protein (221aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_13_Chloroflexi_50_10_curated
adenylate kinase
Adenylate kinase n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8AA58_THEID (db=UNIREF evalue=6.4e-65 bit_score=253.1 identity=55.2 coverage=95.47511312217195)
CHLO_5_2199_11
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

5701..6447
DNA (747bp) protein (249aa)
map; methionine aminopeptidase (EC:3.4.11.18) Tax=RBG_13_Chloroflexi_48_17_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=5 Tax=Dehalococcoides mccartyi RepID=A5FRW6_DEHSB (db=UNIREF evalue=1.1e-81 bit_score=308.9 identity=58.9 coverage=98.39357429718876)
CHLO_5_2199_12
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

6466..6684
DNA (219bp) protein (73aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_13_Chloroflexi_50_10_curated
translation initiation factor IF-1
Translation initiation factor IF-1 n=6 Tax=Dehalococcoidetes RepID=IF1_DEHE1 (db=UNIREF evalue=5.6e-26 bit_score=122.1 identity=79.2 coverage=97.26027397260275)
CHLO_5_2199_13
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


6890..7024
DNA (135bp) protein (45aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_13_Chloroflexi_50_10_curated
30S ribosomal protein S13
SSU ribosomal protein S13P n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZN7_THEOJ (db=UNIREF evalue=1.6e-10 bit_score=70.1 identity=76.7 coverage=93.33333333333333)
CHLO_5_2199_14
unknown

Not on your lists

comp(7517..7651)
DNA (135bp) protein (45aa)
7517..7651 - ( gc_cont=0.563)
CHLO_5_2199_15
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


7690..8322
DNA (633bp) protein (211aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_13_Chloroflexi_50_10_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0HZI6_CALAS (db=UNIREF evalue=2.0e-63 bit_score=248.1 identity=58.7 coverage=99.0521327014218)
CHLO_5_2199_16
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

8332..9357
DNA (1026bp) protein (342aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RBG_13_Chloroflexi_50_10_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=5 Tax=Dehalococcoides mccartyi RepID=RPOA_DEHSC (db=UNIREF evalue=4.0e-82 bit_score=310.8 identity=48.6 coverage=93.27485380116958)
CHLO_5_2199_17
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


9354..9707
DNA (354bp) protein (118aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_13_Chloroflexi_50_10_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=5 Tax=Dehalococcoides mccartyi RepID=RL17_DEHE1 (db=UNIREF evalue=1.1e-34 bit_score=151.8 identity=62.4 coverage=98.30508474576271)
CHLO_5_2199_18
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

9720..10499
DNA (780bp) protein (260aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_13_Chloroflexi_48_17_curated
truA; pseudouridylate synthase (EC:4.2.1.70)
tRNA pseudouridine synthase A n=5 Tax=Dehalococcoides mccartyi RepID=Q3Z951_DEHE1 (db=UNIREF evalue=5.1e-61 bit_score=240.4 identity=53.7 coverage=92.3076923076923)
CHLO_5_2199_19
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists


10496..10936
DNA (441bp) protein (147aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_13_Chloroflexi_48_17_curated
50S ribosomal protein L13
50S ribosomal protein L13 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFF6_THET1 (db=UNIREF evalue=6.2e-48 bit_score=196.1 identity=67.4 coverage=91.15646258503402)
CHLO_5_2199_20
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


10942..11337
DNA (396bp) protein (132aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_13_Chloroflexi_50_10_curated
30S ribosomal protein S9 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K188_DEHLB (db=UNIREF evalue=2.9e-36 bit_score=157.1 identity=59.5 coverage=98.48484848484848)
30S ribosomal protein S9
CHLO_5_2199_21
unknown

Not on your lists

11520..11717
DNA (198bp) protein (66aa)
11520..11717 + ( gc_cont=0.465)
Displaying 21 items

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