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CHLO_6_346

Alias: 19ftChloro_2531

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_6_346_1
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
Suspect SCG annotation. See neighboring gene [CHLO_6_346_2].
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Chloroflexi_50_10_curated
aspartyl-tRNA synthetase
Aspartate--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K061_DEHLB (db=UNIREF evalue=1.0e-14 bit_score=85.1 identity=51.1 coverage=91.66666666666666)
CHLO_6_346_2
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists


279..857
DNA (579bp) protein (193aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_Chloroflexi_50_10_curated
aspS1; aspartyl-tRNA synthetase
Aspartate--tRNA ligase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG11_THET1 (db=UNIREF evalue=1.7e-61 bit_score=241.5 identity=61.5 coverage=92.2279792746114)
CHLO_6_346_3
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

1048..2163
DNA (1116bp) protein (372aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor Tax=RBG_13_Chloroflexi_50_10_curated
tig; trigger factor (EC:5.2.1.8)
Trigger factor n=3 Tax=Dehalococcoides mccartyi RepID=TIG_DEHE1 (db=UNIREF evalue=3.7e-73 bit_score=281.2 identity=37.0 coverage=95.16129032258065)
CHLO_6_346_4
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

2144..2317
DNA (174bp) protein (58aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor Tax=RBG_13_Chloroflexi_50_10_curated
2144..2317 + ( gc_cont=0.437)
CHLO_6_346_5
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

2314..2943
DNA (630bp) protein (210aa)
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RBG_13_Chloroflexi_50_10_curated
clpP; ATP-dependent Clp protease, proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Dehalococcoides mccartyi RepID=CLPP_DEHE1 (db=UNIREF evalue=4.2e-74 bit_score=283.5 identity=66.3 coverage=92.85714285714286)
CHLO_6_346_6
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(2947..3906)
DNA (960bp) protein (320aa)
carbohydrate kinase; K00852 ribokinase [EC:2.7.1.15] Tax=RBG_13_Chloroflexi_50_10_curated
carbohydrate kinase
PfkB domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRE6_DEHSB (db=UNIREF evalue=4.7e-69 bit_score=267.3 identity=43.5 coverage=96.25)
CHLO_6_346_7
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(3913..4899)
DNA (987bp) protein (329aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_10_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RCR1_AMMDK (db=UNIREF evalue=1.2e-64 bit_score=252.7 identity=43.1 coverage=98.78419452887537)
CHLO_6_346_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(4899..5714)
DNA (816bp) protein (272aa)
phosphoribosylglycinamide transformylase Tax=RBG_13_Chloroflexi_50_10_curated
Phosphoribosylglycinamide transformylase, putative n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z8J6_DEHE1 (db=UNIREF evalue=2.7e-81 bit_score=307.8 identity=53.9 coverage=97.79411764705883)
phosphoribosylglycinamide transformylase
phosphoribosylglycinamide transformylase
CHLO_6_346_9
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(5726..6322)
DNA (597bp) protein (199aa)
phosphotransferase domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
phosphotransferase domain-containing protein
PHP C-terminal domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRE8_DEHSB (db=UNIREF evalue=5.6e-44 bit_score=183.3 identity=48.6 coverage=88.44221105527639)
CHLO_6_346_10
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(6378..6938)
DNA (561bp) protein (187aa)
translation elongation factor P; K02356 elongation factor P Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
translation elongation factor P
Elongation factor P n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1W1_SPHTD (db=UNIREF evalue=7.8e-56 bit_score=222.6 identity=56.5 coverage=98.93048128342245)
CHLO_6_346_11
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(6954..8030)
DNA (1077bp) protein (359aa)
M24 family metallopeptidase Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
aminopeptidase
aminopeptidase
Metallopeptidase, M24 family n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z8J3_DEHE1 (db=UNIREF evalue=1.6e-94 bit_score=352.1 identity=48.3 coverage=97.7715877437326)
CHLO_6_346_12
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(8030..8458)
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBI5_THET1 (db=UNIREF evalue=4.0e-36 bit_score=156.8 identity=53.5 coverage=95.1048951048951)
CHLO_6_346_13
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(8455..10581)
DNA (2127bp) protein (709aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=5 Tax=Dehalococcoides mccartyi RepID=A5FRD9_DEHSB (db=UNIREF evalue=4.7e-234 bit_score=816.6 identity=58.1 coverage=98.30747531734838)
CHLO_6_346_14
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(10590..11711)
DNA (1122bp) protein (374aa)
Rossmann fold DNA uptake nucleotide-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
Rossmann fold DNA uptake nucleotide-binding protein
Rossmann fold DNA uptake nucleotide-binding protein
DNA protecting protein DprA n=3 Tax=Dehalococcoides mccartyi RepID=D3SIH5_DEHSG (db=UNIREF evalue=6.9e-112 bit_score=409.8 identity=54.7 coverage=98.3957219251337)
CHLO_6_346_15
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

12165..12284
DNA (120bp) protein (40aa)
Tax=RBG_13_Chloroflexi_48_17_curated
12165..12284 + ( gc_cont=0.425)
CHLO_6_346_16
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

12288..13418
DNA (1131bp) protein (377aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3) Tax=RBG_13_Chloroflexi_48_17_curated
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41)
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41)
Putative methylmalonyl-CoA decarboxylase beta-subunit n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N1L2_ANATU (db=UNIREF evalue=4.4e-106 bit_score=390.6 identity=54.8 coverage=97.87798408488064)
CHLO_6_346_17
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

13439..15199
DNA (1761bp) protein (587aa)
pacL; Cation-transporting ATPase pacL (EC:3.6.3.-) Tax=RBG_13_Chloroflexi_50_10_curated
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IH14_9CHLR (db=UNIREF evalue=1.4e-180 bit_score=638.6 identity=57.1 coverage=96.42248722316864)
HAD superfamily ATPase
CHLO_6_346_18
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

15196..16155
DNA (960bp) protein (320aa)
pacL; Cation-transporting ATPase pacL (EC:3.6.3.-) Tax=RBG_13_Chloroflexi_50_10_curated
pacL; Cation-transporting ATPase pacL (EC:3.6.3.-)
Cation-transporting ATPase pacL n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MI40_9BACT (db=UNIREF evalue=1.1e-97 bit_score=362.5 identity=62.9 coverage=91.5625)
CHLO_6_346_19
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16308..16748
DNA (441bp) protein (147aa)
Putative signal-transduction protein with CBS domains {ECO:0000313|EMBL:GAE33307.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai
16308..16748 + ( gc_cont=0.451)
CHLO_6_346_20
unknown

Not on your lists

comp(16834..17364)
DNA (531bp) protein (177aa)
16834..17364 - ( gc_cont=0.467)
CHLO_6_346_21
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

18218..19105
DNA (888bp) protein (296aa)
pyruvate ferredoxin oxidoreductase subunit gamma/delta (EC:1.2.7.1); K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
pyruvate ferredoxin oxidoreductase subunit gamma/delta (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit n=5 Tax=Dehalococcoides mccartyi RepID=A5FRD1_DEHSB (db=UNIREF evalue=1.7e-57 bit_score=228.8 identity=61.8 coverage=62.5)
CHLO_6_346_22
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

19108..20283
DNA (1176bp) protein (392aa)
porA; 2-oxoacid:ferredoxin oxidoreductase subunit alpha; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
Pyruvate ferredoxin oxidoreductase, alpha subunit n=5 Tax=Dehalococcoides mccartyi RepID=A5FRD3_DEHSB (db=UNIREF evalue=1.7e-137 bit_score=495.0 identity=62.7 coverage=98.72448979591837)
CHLO_6_346_23
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

21172..21621
DNA (450bp) protein (150aa)
NADH dehydrogenase 24 kDa subunit; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
NADH dehydrogenase (ubiquinone) 24 kDa subunit
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K006_DEHLB (db=UNIREF evalue=4.2e-44 bit_score=183.3 identity=55.9 coverage=94.66666666666667)
CHLO_6_346_24
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

21637..21966
DNA (330bp) protein (110aa)
[Fe] hydrogenase, HymB subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_13_Chloroflexi_50_10_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Hydrogenase subunit, NADH dehydrogenase subunit E subfamily n=5 Tax=Dehalococcoides mccartyi RepID=D2BHU8_DEHSV (db=UNIREF evalue=4.5e-27 bit_score=126.3 identity=53.6 coverage=99.0909090909091)
Displaying 24 items

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