ggKbase home page

CHLO_6_537

Alias: 19ftChloro_4704

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_6_537_1
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(2..106)
DNA (105bp) protein (35aa)
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
2..106 - ( gc_cont=0.514)
CHLO_6_537_2
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(103..534)
DNA (432bp) protein (144aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3N1_ANATU (db=UNIREF evalue=1.3e-53 bit_score=214.9 identity=74.1 coverage=97.91666666666666)
CHLO_6_537_3
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(615..1292)
DNA (678bp) protein (226aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CU90_9BACT (db=UNIREF evalue=7.4e-93 bit_score=345.9 identity=75.6 coverage=99.11504424778761)
rpsC; 30S ribosomal protein S3
rpsC; 30S ribosomal protein S3
CHLO_6_537_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(1352..1699)
DNA (348bp) protein (116aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M9_ANATU (db=UNIREF evalue=1.1e-34 bit_score=151.8 identity=64.6 coverage=96.55172413793103)
CHLO_6_537_5
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(1703..1978)
DNA (276bp) protein (92aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M8_ANATU (db=UNIREF evalue=1.5e-39 bit_score=167.5 identity=88.6 coverage=94.56521739130434)
CHLO_6_537_6
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(2059..2895)
DNA (837bp) protein (279aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M7_ANATU (db=UNIREF evalue=1.5e-135 bit_score=488.0 identity=85.3 coverage=97.4910394265233)
CHLO_6_537_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(2895..3197)
DNA (303bp) protein (101aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M6_ANATU (db=UNIREF evalue=2.0e-29 bit_score=134.0 identity=66.7 coverage=97.02970297029702)
CHLO_6_537_8
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(3211..3840)
DNA (630bp) protein (210aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RBG_16_Chloroflexi_52_11_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M5_ANATU (db=UNIREF evalue=2.2e-75 bit_score=287.7 identity=69.9 coverage=98.57142857142858)
CHLO_6_537_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(3940..4479)
DNA (540bp) protein (180aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M4_ANATU (db=UNIREF evalue=1.4e-70 bit_score=271.6 identity=79.0 coverage=91.66666666666666)
CHLO_6_537_10
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(4688..4996)
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Chloroflexi_52_11_curated
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M3_ANATU (db=UNIREF evalue=2.1e-47 bit_score=193.7 identity=92.2 coverage=98.05825242718447)
CHLO_6_537_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5004..5789)
DNA (786bp) protein (262aa)
tufA; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaero
Elongation factor Tu n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N3M2_ANATU (db=UNIREF evalue=1.9e-124 bit_score=451.1 identity=85.4 coverage=99.23664122137404)
CHLO_6_537_12
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5994..6260
DNA (267bp) protein (89aa)
Tax=RBG_13_Actinobacteria_63_9_curated
5994..6260 + ( gc_cont=0.543)
CHLO_6_537_13
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6798..7547)
DNA (750bp) protein (250aa)
RNA methyltransferase (EC:2.1.1.-); K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Chloroflexi_57_11_curated
RNA methyltransferase n=2 Tax=Bacteria RepID=H1A8K0_9BACT (db=UNIREF evalue=3.3e-86 bit_score=323.9 identity=63.9 coverage=99.2)
RNA methyltransferase (EC:2.1.1.-)
UniRef90_H1A8K0 RNA methyltransferase n=2 Tax=Bacteria RepID=H1A8K0_9BACT (db=UNIREF) rbh
CHLO_6_537_14

Not on your lists

comp(7651..7914)
DNA (264bp) protein (88aa)
Marine sediment metagenome DNA, contig: S01H1_L09029 {ECO:0000313|EMBL:GAF97945.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N2T2_ANATU (db=UNIREF evalue=3.6e-19 bit_score=99.8 identity=57.5 coverage=97.72727272727273)
Displaying 14 items

View Taxonomy