ggKbase home page

CHLO_4_387

Alias: 13ftChloro_5481

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_387_1
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..546)
DNA (546bp) protein (182aa)
phage integrase site specific recombinase Tax=RBG_16_Chloroflexi_60_22_curated
phage integrase family protein
Phage integrase family protein n=1 Tax=Dehalococcoides sp. BAV1 RepID=A5FQU2_DEHSB (db=UNIREF evalue=6.1e-37 bit_score=159.8 identity=44.2 coverage=98.9010989010989)
CHLO_4_387_2
unknown

Not on your lists

comp(549..755)
DNA (207bp) protein (69aa)
549..755 - ( gc_cont=0.454)
CHLO_4_387_3
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(829..1380)
DNA (552bp) protein (184aa)
Tax=RBG_16_Chloroflexi_51_9_curated
829..1380 - ( gc_cont=0.462)
CHLO_4_387_4
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1741..1941
DNA (201bp) protein (67aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:KJF15996.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix fe
1741..1941 + ( gc_cont=0.512)
CHLO_4_387_5
Dehalococcoides sp. UCH007, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2184..2738
DNA (555bp) protein (185aa)
DNA, complete genome {ECO:0000313|EMBL:BAQ34130.1}; TaxID=1522671 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides sp.
integrase
Phage integrase family protein n=2 Tax=Dehalococcoides mccartyi RepID=A5FP62_DEHSB (db=UNIREF evalue=2.7e-56 bit_score=224.2 identity=59.3 coverage=95.13513513513514)
CHLO_4_387_6
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

3348..3920
DNA (573bp) protein (191aa)
Tax=RBG_16_Chloroflexi_50_9_curated
3348..3920 + ( gc_cont=0.522)
CHLO_4_387_7
unknown

Not on your lists

comp(4048..4176)
DNA (129bp) protein (43aa)
4048..4176 - ( gc_cont=0.527)
CHLO_4_387_8
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6469..7662)
DNA (1194bp) protein (398aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanothermobacter marburgensis str. Marburg RepID=D9PTX8_METTM (db=UNIREF evalue=3.9e-44 bit_score=184.9 identity=43.0 coverage=60.55276381909548)
CHLO_4_387_9
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(9073..10302)
DNA (1230bp) protein (410aa)
putative two-component histidine kinase Tax=RBG_16_Chloroflexi_50_9_curated
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=3 Tax=Chloroflexus RepID=B8G4S5_CHLAD (db=UNIREF evalue=1.4e-49 bit_score=203.0 identity=32.9 coverage=86.34146341463415)
CHLO_4_387_10
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(10397..10906)
DNA (510bp) protein (170aa)
putative OmpR family two-component system response regulator Tax=RBG_16_Chloroflexi_50_9_curated
putative OmpR family two-component response regulator
Putative OmpR family two-component response regulator n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0IA61_CALAS (db=UNIREF evalue=3.6e-39 bit_score=167.2 identity=49.4 coverage=95.88235294117648)
CHLO_4_387_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

11698..13863
DNA (2166bp) protein (722aa)
response regulator receiver modulated diguanylate cyclase Tax=RBG_16_Chloroflexi_50_9_curated
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridiales RepID=G8LT35_CLOCD (db=UNIREF evalue=2.2e-21 bit_score=110.2 identity=33.9 coverage=25.20775623268698)
CHLO_4_387_12
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

13967..15358
DNA (1392bp) protein (464aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_16_Chloroflexi_56_11_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=3 Tax=Chloroflexus RepID=A9WF67_CHLAA (db=UNIREF evalue=3.8e-120 bit_score=437.6 identity=51.7 coverage=92.67241379310344)
CHLO_4_387_13
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

15392..16051
DNA (660bp) protein (220aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=RBG_16_Chloroflexi_50_9_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8L2_SPHTD (db=UNIREF evalue=3.8e-41 bit_score=174.1 identity=46.1 coverage=89.54545454545455)
CHLO_4_387_14
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

16074..17135
DNA (1062bp) protein (354aa)
oxidoreductase domain-containing protein Tax=RBG_16_Chloroflexi_50_9_curated
oxidoreductase domain-containing protein
oxidoreductase domain-containing protein
Oxidoreductase domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIX8_THET1 (db=UNIREF evalue=2.7e-97 bit_score=361.3 identity=54.0 coverage=94.63276836158192)
CHLO_4_387_15
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

17132..17833
DNA (702bp) protein (234aa)
acetyltransferase Tax=RBG_16_Chloroflexi_56_11_curated
acetyltransferase
Acetyltransferase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VL3_METBU (db=UNIREF evalue=6.8e-41 bit_score=173.3 identity=41.8 coverage=85.04273504273505)
CHLO_4_387_16
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

17808..18953
DNA (1146bp) protein (382aa)
aminotransferase Tax=RBG_16_Chloroflexi_56_11_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIX4_THET1 (db=UNIREF evalue=3.8e-113 bit_score=414.1 identity=56.6 coverage=94.24083769633508)
CHLO_4_387_17
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

18955..20058
DNA (1104bp) protein (368aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
18955..20058 + ( gc_cont=0.521)
Displaying 17 items

View Taxonomy