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CHLO_4_424

Alias: 13ftChloro_5817

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_424_1

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153..428
DNA (276bp) protein (92aa)
Marine sediment metagenome DNA, contig: S03H2_S13255 {ECO:0000313|EMBL:GAH69813.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1D0_DEHLB (db=UNIREF evalue=2.8e-22 bit_score=110.2 identity=62.7 coverage=89.13043478260869)
CHLO_4_424_2

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441..785
DNA (345bp) protein (115aa)
Marine sediment metagenome DNA, contig: S12H4_C05580 {ECO:0000313|EMBL:GAI80965.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein n=4 Tax=Dehalococcoides mccartyi RepID=A5FPW0_DEHSB (db=UNIREF evalue=4.0e-18 bit_score=96.7 identity=43.4 coverage=98.26086956521739)
CHLO_4_424_3
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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1077..1637
DNA (561bp) protein (187aa)
hypothetical protein
hypothetical protein Tax=RBG_16_Chloroflexi_57_8_curated
Putative uncharacterized protein n=4 Tax=Dehalococcoides mccartyi RepID=A5FPW1_DEHSB (db=UNIREF evalue=2.7e-40 bit_score=171.0 identity=45.4 coverage=97.32620320855615)
CHLO_4_424_4
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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1679..3286
DNA (1608bp) protein (536aa)
GH3 auxin-responsive promoter Tax=RBG_13_Chloroflexi_48_17_curated
hypothetical protein
GH3 auxin-responsive promoter n=5 Tax=Dehalococcoides mccartyi RepID=A5FPW2_DEHSB (db=UNIREF evalue=4.5e-157 bit_score=560.5 identity=51.8 coverage=98.69402985074626)
CHLO_4_424_5
unknown

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comp(3325..3510)
DNA (186bp) protein (62aa)
3325..3510 - ( gc_cont=0.473)
CHLO_4_424_6
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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3901..6489
DNA (2589bp) protein (863aa)
GAF sensor-containing diguanylate cyclase Tax=RBG_13_Chloroflexi_56_8b_curated
GGDEF domain-containing protein
Diguanylate cyclase with GAF sensor n=6 Tax=Dehalococcoides mccartyi RepID=A5FPU8_DEHSB (db=UNIREF evalue=3.0e-86 bit_score=325.9 identity=34.0 coverage=66.28041714947857)
CHLO_4_424_7

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6502..7131
DNA (630bp) protein (210aa)
Marine sediment metagenome DNA, contig: S12H4_C00636 {ECO:0000313|EMBL:GAI67093.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9P0_9BACT (db=UNIREF evalue=4.1e-45 bit_score=187.2 identity=46.1 coverage=99.04761904761905)
CHLO_4_424_8
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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7453..8133
DNA (681bp) protein (227aa)
Tax=CG_Dehalo_02
7453..8133 + ( gc_cont=0.524)
CHLO_4_424_9

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8130..8963
DNA (834bp) protein (278aa)
Marine sediment metagenome DNA, contig: S01H1_S17035 {ECO:0000313|EMBL:GAG22304.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
LuxR family transcriptional regulator n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SD31_9BACL (db=UNIREF evalue=1.7e-22 bit_score=112.5 identity=35.8 coverage=69.06474820143885)
response regulator receiver protein
CHLO_4_424_10
unknown

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9023..9370
DNA (348bp) protein (116aa)
9023..9370 + ( gc_cont=0.434)
CHLO_4_424_11
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(9401..10249)
DNA (849bp) protein (283aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RBG_13_Chloroflexi_60_13_curated
Aminotransferase class IV n=8 Tax=Pelosinus fermentans RepID=I8S2W4_9FIRM (db=UNIREF evalue=1.0e-59 bit_score=236.1 identity=45.0 coverage=97.52650176678446)
Aminodeoxychorismate lyase (EC:4.1.3.38)
CHLO_4_424_12
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(10254..10640)
DNA (387bp) protein (129aa)
protein PabA Tax=RBG_13_Chloroflexi_54_8_curated
para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II (EC:2.6.1.85 4.1.3.27)
Para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJD6_THEYD (db=UNIREF evalue=7.6e-42 bit_score=175.6 identity=65.6 coverage=93.02325581395348)
Displaying 12 items

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