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CHLO_4_488

Alias: 13ftChloro_6559

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_488_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
2..97 - ( gc_cont=0.542)
CHLO_4_488_2
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

351..3182
DNA (2832bp) protein (944aa)
diguanylate cyclase Tax=CG_Dehalo_02
diguanylate cyclase and metal dependent phosphohydrolase
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1D2_DEHLB (db=UNIREF evalue=1.9e-121 bit_score=443.0 identity=42.9 coverage=57.41525423728814)
CHLO_4_488_3
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(3184..3834)
DNA (651bp) protein (217aa)
methyltransferase type 11 Tax=RBG_16_Chloroflexi_50_9_curated
methyltransferase type 11
Methyltransferase type 11 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0B2_DEHLB (db=UNIREF evalue=8.0e-60 bit_score=236.1 identity=50.7 coverage=94.93087557603687)
CHLO_4_488_4
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

3913..5244
DNA (1332bp) protein (444aa)
ELP3 family histone acetyltransferase; K07739 elongator complex protein 3 [EC:2.3.1.48] Tax=CG_Dehalo_02
ELP3 family histone acetyltransferase
Histone acetyltransferase, ELP3 family n=5 Tax=Dehalococcoides mccartyi RepID=A5FRJ9_DEHSB (db=UNIREF evalue=9.3e-148 bit_score=529.3 identity=57.3 coverage=99.09909909909909)
CHLO_4_488_5
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(5237..6220)
DNA (984bp) protein (328aa)
oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=RBG_16_Chloroflexi_50_9_curated
oligopeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter, ATP-binding protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0D7_THERP (db=UNIREF evalue=1.0e-103 bit_score=382.5 identity=57.7 coverage=97.2560975609756)
CHLO_4_488_6
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(6220..7194)
DNA (975bp) protein (325aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_13_Chloroflexi_48_17_curated
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MH02_ALKOO (db=UNIREF evalue=2.9e-98 bit_score=364.4 identity=53.1 coverage=97.84615384615385)
CHLO_4_488_7
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(7197..8108)
DNA (912bp) protein (304aa)
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RBG_13_Chloroflexi_48_17_curated
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natrialba magadii ATCC 43099 RepID=D3SY83_NATMM (db=UNIREF evalue=3.8e-76 bit_score=290.8 identity=44.5 coverage=97.69736842105263)
CHLO_4_488_8
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(8111..8695)
DNA (585bp) protein (195aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Chloroflexi_48_17_curated
dppB3; dipeptide/oligopeptide/nickel ABC transporter permease
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Haloferax mediterranei ATCC 33500 RepID=I3R3I1_HALMT (db=UNIREF evalue=6.1e-51 bit_score=206.5 identity=51.6 coverage=97.94871794871794)
CHLO_4_488_9
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(8713..8898)
DNA (186bp) protein (62aa)
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RBG_13_Chloroflexi_48_17_curated
8713..8898 - ( gc_cont=0.457)
CHLO_4_488_10
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(8968..10767)
DNA (1800bp) protein (600aa)
peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_13_Chloroflexi_48_17_curated
peptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=E4NQE6_HALBP (db=UNIREF evalue=1.2e-70 bit_score=273.5 identity=33.4 coverage=87.83333333333333)
CHLO_4_488_11
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(10796..11947)
DNA (1152bp) protein (384aa)
coproporphyrinogen oxidase (NAD) (EC:1.-.-.-); K00540 [EC:1.-.-.-] Tax=RBG_13_Chloroflexi_48_17_curated
coproporphyrinogen oxidase (NAD) (EC:1.-.-.-)
Coproporphyrinogen oxidase (NAD) n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUT6_SYNAS (db=UNIREF evalue=1.0e-97 bit_score=362.8 identity=51.5 coverage=93.22916666666666)
CHLO_4_488_12
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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12054..12707
DNA (654bp) protein (218aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_13_Chloroflexi_48_17_curated
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WLH4_METH6 (db=UNIREF evalue=7.0e-40 bit_score=169.9 identity=40.3 coverage=93.11926605504587)
CHLO_4_488_13
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(12715..13242)
DNA (528bp) protein (176aa)
carbohydrate kinase, PfkB family; K00882 1-phosphofructokinase [EC:2.7.1.56] Tax=RBG_13_Chloroflexi_48_17_curated
1-phosphofructokinase (EC:2.7.1.56)
1-phosphofructokinase n=3 Tax=Dehalococcoides mccartyi RepID=A5FPY9_DEHSB (db=UNIREF evalue=6.5e-44 bit_score=183.0 identity=53.1 coverage=98.86363636363636)
CHLO_4_488_14

Not on your lists

comp(13287..13445)
DNA (159bp) protein (53aa)
Marine sediment metagenome DNA, contig: S03H2_S24392 {ECO:0000313|EMBL:GAH81875.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
carbohydrate kinase
1-phosphofructokinase n=3 Tax=Dehalococcoides mccartyi RepID=A5FPY9_DEHSB (db=UNIREF evalue=2.0e-09 bit_score=66.6 identity=62.0 coverage=92.45283018867924)
CHLO_4_488_15
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(13446..14873)
DNA (1428bp) protein (476aa)
pyk; pyruvate kinase Pyk (EC:2.7.1.40) Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
pyk; pyruvate kinase Pyk (EC:2.7.1.40)
pyk; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase Pyk n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LE75_9THEO (db=UNIREF evalue=1.8e-133 bit_score=481.9 identity=50.7 coverage=98.10924369747899)
CHLO_4_488_16
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(14889..15881)
DNA (993bp) protein (331aa)
tagatose-bisphosphate aldolase (EC:4.1.2.40); K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40] Tax=RBG_13_Chloroflexi_48_17_curated
tagatose-bisphosphate aldolase (EC:4.1.2.40)
tagatose-bisphosphate aldolase (EC:4.1.2.40)
Tagatose-bisphosphate aldolase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1N2_DEHLB (db=UNIREF evalue=6.8e-95 bit_score=353.2 identity=53.4 coverage=97.58308157099698)
CHLO_4_488_17
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

16014..16835
DNA (822bp) protein (274aa)
magnesium and cobalt transport protein Tax=RBG_13_Chloroflexi_48_17_curated
magnesium transporter
Mg2 transporter protein CorA family protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K172_DEHLB (db=UNIREF evalue=6.1e-65 bit_score=253.4 identity=45.2 coverage=93.43065693430657)
CHLO_4_488_18
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

16861..17532
DNA (672bp) protein (224aa)
hypothetical protein; K09125 hypothetical protein Tax=RBG_13_Chloroflexi_48_17_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKL8_9CHLR (db=UNIREF evalue=7.9e-71 bit_score=272.7 identity=58.6 coverage=97.32142857142857)
CHLO_4_488_19
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

17544..18026
DNA (483bp) protein (161aa)
hypothetical protein Tax=RBG_13_Chloroflexi_48_17_curated
hypothetical protein
Putative uncharacterized protein n=3 Tax=Dehalococcoides mccartyi RepID=A5FS32_DEHSB (db=UNIREF evalue=9.5e-26 bit_score=122.5 identity=40.5 coverage=91.30434782608695)
CHLO_4_488_20
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

18054..19640
DNA (1587bp) protein (529aa)
carbohydrate kinase Tax=RBG_13_Chloroflexi_48_17_curated
carbohydrate kinase
Carbohydrate kinase n=1 Tax=Dehalococcoides sp. VS RepID=D2BGS5_DEHSV (db=UNIREF evalue=8.0e-122 bit_score=443.4 identity=47.6 coverage=96.21928166351607)
CHLO_4_488_21
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

19624..20391
DNA (768bp) protein (256aa)
coaX; type III pantothenate kinase (EC:2.7.1.33) Tax=RBG_13_Chloroflexi_48_17_curated
coaX; type III pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=5 Tax=Dehalococcoides mccartyi RepID=COAX_DEHSB (db=UNIREF evalue=1.8e-82 bit_score=311.6 identity=56.9 coverage=98.4375)
UniRef90_A5FS34 Type III pantothenate kinase n=5 Tax=Dehalococcoides mccartyi RepID=COAX_DEHSB (db=UNIREF) rbh
CHLO_4_488_22
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

20405..21592
DNA (1188bp) protein (396aa)
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3Q9_DEHLB (db=UNIREF evalue=1.4e-115 bit_score=422.2 identity=56.3 coverage=96.96969696969697)
CHLO_4_488_23
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists

21749..22810
DNA (1062bp) protein (354aa)
Suspect SCG annotation. See neighboring gene [CHLO_4_488_24].
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Chloroflexi_48_17_curated
valyl-tRNA synthetase
Valine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K158_DEHLB (db=UNIREF evalue=1.3e-128 bit_score=465.3 identity=59.1 coverage=99.15254237288136)
CHLO_4_488_24
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

Not on your lists


22836..24017
DNA (1182bp) protein (394aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Chloroflexi_48_17_curated
valyl-tRNA synthetase
Valine--tRNA ligase n=5 Tax=Dehalococcoides mccartyi RepID=SYV_DEHSC (db=UNIREF evalue=1.9e-104 bit_score=385.2 identity=50.4 coverage=96.19289340101524)
CHLO_4_488_25
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(24014..26164)
DNA (2151bp) protein (717aa)
DNA polymerase IV; K02347 DNA polymerase (family X) Tax=RBG_13_Chloroflexi_50_10_curated
DNA polymerase IV
DNA polymerase IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWZ5_SYNAS (db=UNIREF evalue=6.7e-164 bit_score=583.6 identity=62.2 coverage=63.59832635983263)
CHLO_4_488_26
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

comp(26206..26640)
DNA (435bp) protein (145aa)
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RBG_16_Chloroflexi_48_7_curated
secA; preprotein translocase
Protein translocase subunit SecA n=5 Tax=Dehalococcoides mccartyi RepID=SECA_DEHSC (db=UNIREF evalue=1.1e-36 bit_score=158.7 identity=50.6 coverage=89.65517241379311)
CHLO_4_488_27
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(26622..28640)
DNA (2019bp) protein (673aa)
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RBG_13_Chloroflexi_50_10_curated
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA n=5 Tax=Dehalococcoides mccartyi RepID=SECA_DEHSC (db=UNIREF evalue=2.3e-243 bit_score=847.4 identity=63.5 coverage=95.54234769687965)
CHLO_4_488_28
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(28649..29587)
DNA (939bp) protein (313aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RBG_13_Chloroflexi_50_10_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1F2_DEHLB (db=UNIREF evalue=1.5e-128 bit_score=464.9 identity=72.7 coverage=99.04153354632588)
CHLO_4_488_29
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

29669..30349
DNA (681bp) protein (227aa)
Predicted EndoIII-related endonuclease (EC:4.2.99.18) Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9AYR4_HERA2 (db=UNIREF evalue=4.1e-43 bit_score=180.6 identity=42.5 coverage=93.3920704845815)
CHLO_4_488_30
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

30449..31570
DNA (1122bp) protein (374aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
Methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase
cyclopropane fatty acyl phospholipid synthase n=1 Tax=gamma proteobacterium SCGC AAA001-B15 RepID=UPI0002485AE2 (db=UNIREF evalue=3.0e-139 bit_score=500.7 identity=62.5 coverage=97.05882352941177)
Displaying items 1-30 of 31 in total

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