ggKbase home page

CHLO_4_587

Alias: 13ftChloro_7595

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_587_1

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
Marine sediment metagenome DNA, contig: S03H2_S22739 {ECO:0000313|EMBL:GAH78303.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3K3_DEHLB (db=UNIREF evalue=7.3e-30 bit_score=136.3 identity=54.5 coverage=68.64864864864865)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
CHLO_4_587_2
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(553..1614)
DNA (1062bp) protein (354aa)
peptidase M50; K01417 [EC:3.4.24.-] Tax=RBG_13_Chloroflexi_56_8b_curated
Site-2 protease, Metallo peptidase, MEROPS family M50B n=5 Tax=Dehalococcoides mccartyi RepID=A5FS86_DEHSB (db=UNIREF evalue=7.3e-103 bit_score=379.8 identity=52.1 coverage=97.17514124293785)
peptidase M50
peptidase M50
CHLO_4_587_3
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(1611..2756)
DNA (1146bp) protein (382aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_13_Chloroflexi_56_8b_curated
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z9I2_DEHE1 (db=UNIREF evalue=3.6e-132 bit_score=477.2 identity=62.3 coverage=97.90575916230367)
CHLO_4_587_4
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(2744..3187)
DNA (444bp) protein (148aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_13_Chloroflexi_56_8b_curated
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3K7_DEHLB (db=UNIREF evalue=7.4e-41 bit_score=172.6 identity=58.5 coverage=97.2972972972973)
CHLO_4_587_5

Not on your lists

comp(3367..3738)
DNA (372bp) protein (124aa)
Marine sediment metagenome DNA, contig: S06H3_S20991 {ECO:0000313|EMBL:GAI57597.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Isoprenyl transferase n=1 Tax=uncultured prokaryote RepID=H5SIS3_9ZZZZ (db=UNIREF evalue=3.0e-35 bit_score=153.7 identity=68.9 coverage=82.25806451612904)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
CHLO_4_587_6
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(3953..4510)
DNA (558bp) protein (186aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_13_Chloroflexi_56_8b_curated
Ribosome-recycling factor n=5 Tax=Dehalococcoides mccartyi RepID=RRF_DEHSC (db=UNIREF evalue=6.2e-61 bit_score=239.6 identity=62.7 coverage=98.9247311827957)
ribosome recycling factor
CHLO_4_587_7
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(4512..5006)
DNA (495bp) protein (165aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_13_Chloroflexi_56_8b_curated
uridylate kinase
Uridylate kinase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K141_DEHLB (db=UNIREF evalue=2.4e-64 bit_score=250.8 identity=78.0 coverage=98.7878787878788)
CHLO_4_587_8
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(5037..5555)
DNA (519bp) protein (173aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_13_Chloroflexi_56_8b_curated
elongation factor Ts
Elongation factor Ts n=5 Tax=Dehalococcoides mccartyi RepID=A5FS78_DEHSB (db=UNIREF evalue=3.0e-54 bit_score=217.2 identity=64.5 coverage=95.37572254335261)
CHLO_4_587_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists


comp(5552..6514)
DNA (963bp) protein (321aa)
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_13_Chloroflexi_56_8b_curated
30S ribosomal protein S2
30S ribosomal protein S2
30S ribosomal protein S2 n=5 Tax=Dehalococcoides mccartyi RepID=RS2_DEHE1 (db=UNIREF evalue=8.3e-98 bit_score=362.8 identity=74.3 coverage=67.601246105919)
CHLO_4_587_10
unknown

Not on your lists

6696..6809
DNA (114bp) protein (38aa)
6696..6809 + ( gc_cont=0.579)
CHLO_4_587_11
unknown

Not on your lists

comp(6907..7203)
DNA (297bp) protein (99aa)
6907..7203 - ( gc_cont=0.492)
CHLO_4_587_12
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(7290..7889)
DNA (600bp) protein (200aa)
TRAP transporter subunit DctM Tax=RBG_13_Chloroflexi_56_8b_curated
TRAP dicarboxylate transporter subunit DctM
TRAP transporter, DctM subunit n=1 Tax=Desulfosporosinus meridiei DSM 13257 RepID=J7ITR3_DESMD (db=UNIREF evalue=8.4e-48 bit_score=196.1 identity=56.5 coverage=76.5)
CHLO_4_587_13
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(7831..8202)
DNA (372bp) protein (124aa)
TRAP dicarboxylate transporter subunit DctM Tax=RBG_16_Chloroflexi_60_22_curated
TRAP dicarboxylate transporter subunit DctM
TRAP transporter, DctM subunit n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AZW6_9DELT (db=UNIREF evalue=6.8e-32 bit_score=142.5 identity=57.1 coverage=95.16129032258065)
CHLO_4_587_14
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(8199..8690)
DNA (492bp) protein (164aa)
tripartite ATP-independent periplasmic transporter DctQ Tax=RBG_13_Chloroflexi_56_8b_curated
TRAP transporter, DctQ-like membrane protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWT5_9DELT (db=UNIREF evalue=3.9e-19 bit_score=100.5 identity=34.0 coverage=97.5609756097561)
tripartite ATP-independent periplasmic transporter DctQ
CHLO_4_587_15
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

comp(8805..9953)
DNA (1149bp) protein (383aa)
TRAP dicarboxylate transporter-DctP subunit Tax=RBG_13_Chloroflexi_56_8b_curated
TRAP dicarboxylate transporter-DctP subunit
Extracellular solute-binding protein, family 7 n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=E6VYM7_DESAO (db=UNIREF evalue=8.8e-54 bit_score=216.9 identity=34.8 coverage=86.16187989556136)
CHLO_4_587_16
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

10471..11883
DNA (1413bp) protein (471aa)
carboxylesterase Tax=RBG_13_Chloroflexi_56_8b_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EQ93_9BACT (db=UNIREF evalue=4.0e-72 bit_score=278.1 identity=46.2 coverage=71.3375796178344)
carboxylesterase
CHLO_4_587_17
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

12560..13897
DNA (1338bp) protein (446aa)
paaK; phenylacetate-CoA ligase (aerobic) PaaK (EC:6.2.1.30) Tax=RBG_13_Chloroflexi_56_8b_curated
paaK; phenylacetate-CoA ligase (aerobic) PaaK (EC:6.2.1.30)
paaK; phenylacetate-CoA ligase (aerobic) PaaK (EC:6.2.1.30)
PaaK: putative phenylacetate-CoA ligase (Aerobic) n=1 Tax=Desulfobacula toluolica Tol2 RepID=K0NFK9_DESTT (db=UNIREF evalue=1.4e-183 bit_score=648.3 identity=69.4 coverage=97.75784753363229)
CHLO_4_587_18
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

13899..14078
DNA (180bp) protein (60aa)
Marine sediment metagenome DNA, contig: S03H2_S16110 Tax=RBG_13_Chloroflexi_56_8b_curated
13899..14078 + ( gc_cont=0.389)
CHLO_4_587_19
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

14115..14870
DNA (756bp) protein (252aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_13_Chloroflexi_56_8b_curated
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WQN2_ALIAD (db=UNIREF evalue=2.9e-45 bit_score=188.0 identity=42.3 coverage=81.34920634920636)
CHLO_4_587_20
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

15190..15798
DNA (609bp) protein (203aa)
acetyl-CoA acetyltransferase Tax=RBG_13_Chloroflexi_56_8b_curated
acetyl-CoA acetyltransferase
Propanoyl-CoA C-acyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I853_9FIRM (db=UNIREF evalue=8.2e-51 bit_score=206.1 identity=51.9 coverage=91.62561576354679)
CHLO_4_587_21
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

15833..16222
DNA (390bp) protein (130aa)
acetyl-CoA acetyltransferase Tax=RBG_13_Chloroflexi_56_8b_curated
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C3P8_DESTA (db=UNIREF evalue=2.5e-40 bit_score=170.6 identity=61.1 coverage=96.15384615384616)
CHLO_4_587_22
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

16232..16729
DNA (498bp) protein (166aa)
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RBG_13_Chloroflexi_56_8b_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
Putative uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I852_9FIRM (db=UNIREF evalue=1.3e-38 bit_score=165.2 identity=49.4 coverage=89.7590361445783)
CHLO_4_587_23
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(16758..17924)
DNA (1167bp) protein (389aa)
sugar phosphate permease Tax=RBG_16_Chloroflexi_60_22_curated
sugar phosphate permease
Sugar phosphate permease n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4CE05_DESTA (db=UNIREF evalue=3.5e-74 bit_score=284.6 identity=41.3 coverage=92.03084832904884)
Displaying 23 items

View Taxonomy