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CHLO_4_1176

Alias: 13ftChloro_13728

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_1176_1
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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2..589
DNA (588bp) protein (196aa)
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
radA; DNA repair protein RadA
DNA repair protein radA n=5 Tax=Dehalococcoides mccartyi RepID=A5FSU6_DEHSB (db=UNIREF evalue=1.7e-53 bit_score=214.9 identity=57.6 coverage=96.42857142857143)
CHLO_4_1176_2
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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600..1283
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K311_DEHLB (db=UNIREF evalue=3.6e-55 bit_score=220.7 identity=50.7 coverage=96.05263157894737)
CHLO_4_1176_3
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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1284..1757
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Tepidanaerobacter acetatoxydans RepID=F4LRG0_TEPAE (db=UNIREF evalue=1.6e-49 bit_score=201.4 identity=60.9 coverage=98.10126582278481)
CHLO_4_1176_4

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2059..2730
DNA (672bp) protein (224aa)
Marine sediment metagenome DNA, contig: S12H4_C03239 {ECO:0000313|EMBL:GAI64949.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=2 Tax=Dictyoglomus RepID=B8E093_DICTD (db=UNIREF evalue=4.5e-66 bit_score=256.9 identity=60.0 coverage=91.07142857142857)
CHLO_4_1176_5
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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2731..4170
DNA (1440bp) protein (480aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
cysteinyl-tRNA synthetase
Cysteine--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K309_DEHLB (db=UNIREF evalue=4.2e-146 bit_score=523.9 identity=55.8 coverage=99.58333333333333)
CHLO_4_1176_6

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4328..4549
DNA (222bp) protein (74aa)
Marine sediment metagenome DNA, contig: S12H4_L03996 {ECO:0000313|EMBL:GAI86226.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermococcus sp. 4557 RepID=G0HLI6_THES4 (db=UNIREF evalue=4.1e-16 bit_score=89.4 identity=58.9 coverage=93.24324324324324)
CHLO_4_1176_7
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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4694..5584
DNA (891bp) protein (297aa)
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
YD repeat-containing protein
YD repeat protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVU3_DESOH (db=UNIREF evalue=6.7e-17 bit_score=94.0 identity=34.2 coverage=63.2996632996633)
CHLO_4_1176_8
unknown

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comp(5935..6054)
DNA (120bp) protein (40aa)
5935..6054 - ( gc_cont=0.525)
CHLO_4_1176_9
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(6051..6218)
DNA (168bp) protein (56aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
secG; preprotein translocase, SecG subunit
Preprotein translocase, SecG subunit n=5 Tax=Dehalococcoides mccartyi RepID=A5FPJ9_DEHSB (db=UNIREF evalue=4.1e-08 bit_score=62.4 identity=69.0 coverage=73.21428571428571)
CHLO_4_1176_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(6211..7164)
DNA (954bp) protein (318aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=CG_Dehalo_02
aspartyl/glutamyl-tRNA amidotransferase subunit B
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CR24_DESK7 (db=UNIREF evalue=1.5e-94 bit_score=352.1 identity=55.9 coverage=94.65408805031447)
Displaying 10 items

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