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CHLO_4_1934

Alias: 13ftChloro_22364

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_1934_1
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
Marine sediment metagenome DNA, contig: S12H4_S07902 Tax=RBG_13_Chloroflexi_52_12_curated
3..266 - ( gc_cont=0.610)
CHLO_4_1934_2
unknown

Not on your lists

comp(277..489)
DNA (213bp) protein (71aa)
277..489 - ( gc_cont=0.563)
CHLO_4_1934_3
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(545..919)
DNA (375bp) protein (125aa)
Marine sediment metagenome DNA, contig: S06H3_L00880 Tax=RBG_13_Chloroflexi_52_12_curated
545..919 - ( gc_cont=0.611)
CHLO_4_1934_4
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(921..1385)
DNA (465bp) protein (155aa)
type II secretion system protein F Tax=RBG_13_Chloroflexi_51_18_curated
type II secretion system protein F
Type II secretion system protein n=4 Tax=Dehalococcoides mccartyi RepID=A5FPY3_DEHSB (db=UNIREF evalue=4.9e-27 bit_score=126.7 identity=37.3 coverage=98.06451612903226)
CHLO_4_1934_5
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(1337..1615)
DNA (279bp) protein (93aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RBG_13_Chloroflexi_52_12_curated
1337..1615 - ( gc_cont=0.649)
CHLO_4_1934_6
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(1753..3435)
DNA (1683bp) protein (561aa)
pulE; type II secretion system protein; K02454 general secretion pathway protein E Tax=RBG_13_Chloroflexi_57_8_curated
secretion system protein E
Type II secretion system protein E n=4 Tax=Dehalococcoides mccartyi RepID=A5FPY2_DEHSB (db=UNIREF evalue=3.7e-133 bit_score=481.1 identity=51.6 coverage=85.73975044563281)
CHLO_4_1934_7
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3435..4601)
DNA (1167bp) protein (389aa)
putative two-component response regulator; K02282 pilus assembly protein CpaE Tax=RBG_13_Chloroflexi_57_8_curated
Response regulator receiver protein n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SBB3_9CHLR (db=UNIREF evalue=3.7e-31 bit_score=141.7 identity=29.6 coverage=79.69151670951156)
putative two-component response regulator
CHLO_4_1934_8
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(4601..5974)
DNA (1374bp) protein (458aa)
PAS sensor protein; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_13_Chloroflexi_51_18_curated
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio fructosovorans JJ RepID=E1JRG9_DESFR (db=UNIREF evalue=6.0e-33 bit_score=147.9 identity=30.7 coverage=88.20960698689956)
sensor histidine kinase
CHLO_4_1934_9
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(6118..6528)
DNA (411bp) protein (137aa)
Tax=RBG_13_Chloroflexi_57_8_curated
6118..6528 - ( gc_cont=0.616)
CHLO_4_1934_10
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(6579..6938)
DNA (360bp) protein (120aa)
general secretion protein G Tax=RBG_13_Chloroflexi_57_8_curated
general secretion protein G
General secretion n=1 Tax=Dehalococcoides sp. VS RepID=D2BIV6_DEHSV (db=UNIREF evalue=1.3e-11 bit_score=75.1 identity=39.5 coverage=95.0)
CHLO_4_1934_11
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

7212..7598
DNA (387bp) protein (129aa)
Tax=RBG_13_Chloroflexi_57_8_curated
7212..7598 + ( gc_cont=0.571)
CHLO_4_1934_12
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

7628..8443
DNA (816bp) protein (272aa)
Tax=RBG_13_Chloroflexi_57_8_curated
7628..8443 + ( gc_cont=0.593)
CHLO_4_1934_13
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

8611..9072
DNA (462bp) protein (154aa)
CoA-substrate-specific enzyme activase Tax=RBG_13_Chloroflexi_51_52_curated
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase, putative n=1 Tax=Desulfitobacterium dehalogenans ATCC 51507 RepID=I4AB39_9FIRM (db=UNIREF evalue=1.3e-19 bit_score=102.1 identity=56.0 coverage=57.7922077922078)
CHLO_4_1934_14
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

9017..9559
DNA (543bp) protein (181aa)
CoA-substrate-specific enzyme activase Tax=RBG_13_Chloroflexi_57_8_curated
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q104_9BACT (db=UNIREF evalue=3.5e-45 bit_score=187.2 identity=57.5 coverage=87.84530386740332)
CoA-substrate-specific enzyme activase
CHLO_4_1934_15
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

9532..12096
DNA (2565bp) protein (855aa)
CoA-substrate-specific enzyme activase Tax=RBG_13_Chloroflexi_57_8_curated
Putative CoA enzyme activase n=1 Tax=planctomycete KSU-1 RepID=I3IIH5_9PLAN (db=UNIREF evalue=6.4e-137 bit_score=494.2 identity=51.3 coverage=53.45029239766082)
CoA-substrate-specific enzyme activase
CHLO_4_1934_16
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(12083..12379)
DNA (297bp) protein (99aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanosaeta concilii GP6 RepID=F4BVZ0_METCG (db=UNIREF evalue=1.9e-08 bit_score=64.3 identity=36.1 coverage=95.95959595959596)
CHLO_4_1934_17
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(12418..12840)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Natrialba magadii ATCC 43099 RepID=D3SXC1_NATMM (db=UNIREF evalue=3.7e-18 bit_score=97.1 identity=37.8 coverage=88.65248226950354)
CHLO_4_1934_18
unknown

Not on your lists

comp(12998..13102)
DNA (105bp) protein (35aa)
12998..13102 - ( gc_cont=0.467)
CHLO_4_1934_19
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(13128..13550)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_11_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali B3 RepID=D8J2C0_HALJB (db=UNIREF evalue=2.7e-24 bit_score=117.5 identity=42.8 coverage=95.0354609929078)
CHLO_4_1934_20
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

14054..15190
DNA (1137bp) protein (379aa)
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_13_Chloroflexi_57_8_curated
dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z9I2_DEHE1 (db=UNIREF evalue=7.0e-128 bit_score=463.0 identity=61.2 coverage=98.41688654353563)
CHLO_4_1934_21
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

15187..16245
DNA (1059bp) protein (353aa)
membrane-associated zinc metalloprotease; K01417 [EC:3.4.24.-] Tax=RBG_13_Chloroflexi_57_8_curated
membrane-associated zinc metalloprotease
Site-2 protease, Metallo peptidase, MEROPS family M50B n=5 Tax=Dehalococcoides mccartyi RepID=A5FS86_DEHSB (db=UNIREF evalue=2.4e-98 bit_score=364.8 identity=49.6 coverage=96.3172804532578)
CHLO_4_1934_22
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

16330..17334
DNA (1005bp) protein (335aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Chloroflexi_56_11_curated
ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=5 Tax=Dehalococcoides mccartyi RepID=ISPG_DEHSB (db=UNIREF evalue=3.6e-128 bit_score=463.8 identity=68.0 coverage=99.40298507462687)
CHLO_4_1934_23
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

17568..18038
DNA (471bp) protein (157aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
17568..18038 + ( gc_cont=0.520)
CHLO_4_1934_24
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

18005..18196
DNA (192bp) protein (64aa)
hypothetical protein Tax=RBG_13_Chloroflexi_57_8_curated
18005..18196 + ( gc_cont=0.469)
CHLO_4_1934_25
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

18215..19036
DNA (822bp) protein (274aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_13_Chloroflexi_57_8_curated
Proline--tRNA ligase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3K1_DEHLB (db=UNIREF evalue=1.3e-99 bit_score=368.6 identity=69.8 coverage=96.35036496350365)
prolyl-tRNA synthetase
CHLO_4_1934_26
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

19026..19187
DNA (162bp) protein (54aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_13_Chloroflexi_51_18_curated
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=5 Tax=Dehalococcoides mccartyi RepID=SYP_DEHSC (db=UNIREF evalue=2.3e-08 bit_score=63.2 identity=59.3 coverage=98.14814814814815)
Displaying 26 items

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