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CHLO_4_2208

Alias: 13ftChloro_27769

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_2208_1

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3..782
DNA (780bp) protein (260aa)
Marine sediment metagenome DNA, contig: S06H3_S13021 {ECO:0000313|EMBL:GAI38524.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
fatty acid/phospholipid synthesis protein PlsX
Phosphate acyltransferase n=5 Tax=Dehalococcoides mccartyi RepID=PLSX_DEHSC (db=UNIREF evalue=1.7e-85 bit_score=321.6 identity=62.1 coverage=97.6923076923077)
CHLO_4_2208_2
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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757..1083
DNA (327bp) protein (109aa)
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RBG_13_Chloroflexi_56_8b_curated
thioredoxin
Thioredoxin n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3N5_JONDD (db=UNIREF evalue=3.8e-26 bit_score=123.2 identity=54.6 coverage=98.1651376146789)
CHLO_4_2208_3
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

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1089..2006
DNA (918bp) protein (306aa)
TrxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_13_Chloroflexi_51_36_curated
thioredoxin reductase
Thioredoxin reductase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K017_DEHLB (db=UNIREF evalue=4.1e-94 bit_score=350.5 identity=56.7 coverage=97.7124183006536)
CHLO_4_2208_4

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2081..2827
DNA (747bp) protein (249aa)
Marine sediment metagenome DNA, contig: S06H3_S21137 {ECO:0000313|EMBL:GAI58409.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
50S ribosomal protein L9
50S ribosomal protein L9 n=3 Tax=Dehalococcoides mccartyi RepID=RL9_DEHSB (db=UNIREF evalue=2.3e-34 bit_score=151.8 identity=53.6 coverage=57.831325301204814)
CHLO_4_2208_5
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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2829..4244
DNA (1416bp) protein (472aa)
dnaB; replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RBG_13_Chloroflexi_56_8b_curated
dnaB; replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase n=5 Tax=Dehalococcoides mccartyi RepID=A5FRS9_DEHSB (db=UNIREF evalue=4.1e-154 bit_score=550.4 identity=60.9 coverage=96.39830508474576)
CHLO_4_2208_6

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4195..4716
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S03H2_S13884 {ECO:0000313|EMBL:GAH62641.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
DNA damage-indicible protein DnaD
DnaD/phage-associated domain protein n=2 Tax=Dehalococcoides mccartyi RepID=Q3Z916_DEHE1 (db=UNIREF evalue=5.3e-38 bit_score=163.3 identity=48.3 coverage=98.85057471264368)
CHLO_4_2208_7

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4694..5395
DNA (702bp) protein (234aa)
Marine sediment metagenome DNA, contig: S01H1_S36757 {ECO:0000313|EMBL:GAG46288.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ATP-binding protein
DNA replication protein n=5 Tax=Dehalococcoides mccartyi RepID=D2BH33_DEHSV (db=UNIREF evalue=1.3e-63 bit_score=248.8 identity=63.0 coverage=80.34188034188034)
CHLO_4_2208_8

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5452..5973
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S06H3_C03004 {ECO:0000313|EMBL:GAH98497.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
HNH endonuclease
HNH endonuclease n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG39_THET1 (db=UNIREF evalue=1.2e-47 bit_score=195.3 identity=54.3 coverage=93.10344827586206)
CHLO_4_2208_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(5977..6795)
DNA (819bp) protein (273aa)
PSP1 domain-containing protein Tax=RBG_13_Chloroflexi_56_8b_curated
PSP1-like protein
PSP1 domain protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FRS5_DEHSB (db=UNIREF evalue=2.5e-79 bit_score=301.2 identity=54.4 coverage=97.8021978021978)
CHLO_4_2208_10
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(6799..7800)
DNA (1002bp) protein (334aa)
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RBG_13_Chloroflexi_56_8b_curated
DNA polymerase III subunit delta'
DNA polymerase III, delta prime subunit n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3Z920_DEHE1 (db=UNIREF evalue=2.2e-69 bit_score=268.5 identity=44.6 coverage=98.20359281437125)
CHLO_4_2208_11

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comp(7816..8664)
DNA (849bp) protein (283aa)
Marine sediment metagenome DNA, contig: S03H2_C01647 {ECO:0000313|EMBL:GAH19564.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
diaminopimelate decarboxylase
Diaminopimelate decarboxylase n=5 Tax=Dehalococcoides mccartyi RepID=A5FRS3_DEHSB (db=UNIREF evalue=1.4e-96 bit_score=358.6 identity=60.5 coverage=98.93992932862191)
Displaying 11 items

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