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CHLO_4_2326

Alias: 13ftChloro_30086

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_2326_1

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1..324
DNA (324bp) protein (108aa)
Marine sediment metagenome DNA, contig: S06H3_S06187 {ECO:0000313|EMBL:GAI30301.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
trpD1; anthranilate phosphoribosyltransferase
Anthranilate phosphoribosyltransferase n=2 Tax=Methanotorris RepID=H1KYB0_9EURY (db=UNIREF evalue=1.4e-20 bit_score=104.8 identity=46.7 coverage=93.51851851851852)
CHLO_4_2326_2
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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328..1098
DNA (771bp) protein (257aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RBG_13_Chloroflexi_52_14_curated
indole-3-glycerol phosphate synthase
Indole-3-glycerol phosphate synthase n=1 Tax=Dehalococcoides sp. VS RepID=D2BJ56_DEHSV (db=UNIREF evalue=5.0e-69 bit_score=266.9 identity=54.4 coverage=99.22178988326849)
CHLO_4_2326_3
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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1095..1736
DNA (642bp) protein (214aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24) Tax=RBG_13_Chloroflexi_56_8b_curated
trpF; phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Dehalococcoides sp. VS RepID=D2BJ57_DEHSV (db=UNIREF evalue=5.6e-50 bit_score=203.4 identity=46.3 coverage=98.5981308411215)
CHLO_4_2326_4
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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1770..2048
DNA (279bp) protein (93aa)
3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
aroF; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=5 Tax=Dehalococcoides mccartyi RepID=A5FPM5_DEHSB (db=UNIREF evalue=9.1e-21 bit_score=105.1 identity=62.5 coverage=84.94623655913979)
CHLO_4_2326_5
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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2045..2602
DNA (558bp) protein (186aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RBG_16_Chloroflexi_60_22_curated
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=5 Tax=Dehalococcoides mccartyi RepID=A5FPM5_DEHSB (db=UNIREF evalue=9.5e-70 bit_score=268.9 identity=75.4 coverage=97.84946236559139)
CHLO_4_2326_6
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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2599..3681
DNA (1083bp) protein (361aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RBG_13_Chloroflexi_56_8b_curated
3-dehydroquinate synthase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPS0_9FIRM (db=UNIREF evalue=9.4e-74 bit_score=283.1 identity=43.6 coverage=93.90581717451524)
3-dehydroquinate synthase
CHLO_4_2326_7
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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3678..4124
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RBG_13_Chloroflexi_56_8b_curated
3-dehydroquinate dehydratase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0ICL0_9BACL (db=UNIREF evalue=7.2e-36 bit_score=156.0 identity=57.4 coverage=93.95973154362416)
3-dehydroquinate dehydratase (EC:4.2.1.10)
CHLO_4_2326_8

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4121..5404
DNA (1284bp) protein (428aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1V0_METPS (db=UNIREF evalue=9.1e-92 bit_score=343.2 identity=46.1 coverage=97.19626168224299)
CHLO_4_2326_9
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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5591..6421
DNA (831bp) protein (277aa)
shikimate 5-dehydrogenase, AroE (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] Tax=RBG_13_Chloroflexi_56_8b_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FBR7_9BACT (db=UNIREF evalue=8.1e-49 bit_score=199.9 identity=45.3 coverage=82.67148014440433)
shikimate dehydrogenase
CHLO_4_2326_10

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6381..6710
DNA (330bp) protein (110aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL82461.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDM5_THET1 (db=UNIREF evalue=1.1e-28 bit_score=131.7 identity=57.1 coverage=93.63636363636364)
CHLO_4_2326_11
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists

6712..7275
DNA (564bp) protein (188aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5] Tax=RBG_13_Chloroflexi_56_8b_curated
aroC; chorismate synthase AroC (EC:4.2.3.5)
Chorismate synthase AroC n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LV23_9THEO (db=UNIREF evalue=3.8e-50 bit_score=203.8 identity=56.3 coverage=96.27659574468085)
CHLO_4_2326_12
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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7272..8456
DNA (1185bp) protein (395aa)
trpB; tryptophan synthase, beta subunit (EC:4.2.1.20) Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
trpB; tryptophan synthase, beta subunit (EC:4.2.1.20)
trpB; tryptophan synthase, beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=5 Tax=Dehalococcoides mccartyi RepID=A5FPM6_DEHSB (db=UNIREF evalue=9.1e-163 bit_score=578.9 identity=72.0 coverage=97.9746835443038)
CHLO_4_2326_13
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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8453..9223
DNA (771bp) protein (257aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RBG_13_Chloroflexi_56_8b_curated
tryptophan synthase subunit alpha rbh
tryptophan synthase subunit alpha rbh
Tryptophan synthase alpha chain n=4 Tax=Dehalococcoides mccartyi RepID=TRPA_DEHE1 (db=UNIREF evalue=1.5e-86 bit_score=325.1 identity=62.5 coverage=98.44357976653697)
CHLO_4_2326_14
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(9248..9721)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RBG_13_Chloroflexi_56_8b_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Acetobacterium woodii DSM 1030 RepID=H6LJ67_ACEWD (db=UNIREF evalue=5.7e-15 bit_score=86.7 identity=31.5 coverage=87.9746835443038)
CHLO_4_2326_15
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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comp(9873..10091)
DNA (219bp) protein (73aa)
two-component system sensor kinase Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PS35_9RHOO (db=UNIREF evalue=6.3e-09 bit_score=65.5 identity=48.6 coverage=93.15068493150685)
CHLO_4_2326_16
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(10088..11146)
DNA (1059bp) protein (353aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RBG_13_Chloroflexi_56_8b_curated
PAS domain S-box n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U3I2_9EURY (db=UNIREF evalue=1.6e-49 bit_score=202.6 identity=39.7 coverage=78.47025495750708)
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
CHLO_4_2326_17
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(11164..11829)
DNA (666bp) protein (222aa)
LuxR family transcriptional regulator Tax=RBG_13_Chloroflexi_56_8b_curated
signal transduction response regulator, LuxR family
Two component transcriptional regulator, LuxR family n=5 Tax=Dehalococcoides mccartyi RepID=A5FRG1_DEHSB (db=UNIREF evalue=9.9e-66 bit_score=255.8 identity=57.7 coverage=97.74774774774775)
CHLO_4_2326_18
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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12082..12579
DNA (498bp) protein (166aa)
HymA-like protein Tax=RBG_13_Chloroflexi_56_8b_curated
HymA-like protein
NADH dehydrogenase subunit E n=5 Tax=Dehalococcoides mccartyi RepID=A5FR06_DEHSB (db=UNIREF evalue=2.8e-41 bit_score=174.1 identity=50.7 coverage=87.34939759036145)
CHLO_4_2326_19
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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12596..13993
DNA (1398bp) protein (466aa)
[Fe] hydrogenase, HymB subunit; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_13_Chloroflexi_56_8b_curated
NADH dehydrogenase
[Fe] hydrogenase, HymB subunit n=5 Tax=Dehalococcoides mccartyi RepID=D2BHH8_DEHSV (db=UNIREF evalue=1.7e-168 bit_score=598.2 identity=66.6 coverage=89.69957081545064)
CHLO_4_2326_20
unknown

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comp(13929..14651)
DNA (723bp) protein (241aa)
13929..14651 - ( gc_cont=0.580)
Displaying 20 items

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