ggKbase home page

CHLO_4_2532

Alias: 13ftChloro_35465

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CHLO_4_2532_1

Not on your lists

1..225
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S01H1_C00115 {ECO:0000313|EMBL:GAF72103.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ABC transporter
ABC transporter related protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IG08_9CHLR (db=UNIREF evalue=8.4e-17 bit_score=91.7 identity=63.9 coverage=80.0)
CHLO_4_2532_2

Not on your lists

222..1304
DNA (1083bp) protein (361aa)
Marine sediment metagenome DNA, contig: S01H1_S42297 {ECO:0000313|EMBL:GAG48362.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
antimicrobial peptide ABC transporter permease
Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDA4_DESAA (db=UNIREF evalue=5.6e-50 bit_score=204.1 identity=34.7 coverage=99.44598337950139)
CHLO_4_2532_3
unknown

Not on your lists

comp(1290..1892)
DNA (603bp) protein (201aa)
1290..1892 - ( gc_cont=0.645)
CHLO_4_2532_4
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

2033..2863
DNA (831bp) protein (277aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RBG_13_Chloroflexi_60_13_curated
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase UppP n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LGR3_9THEO (db=UNIREF evalue=6.6e-59 bit_score=233.4 identity=48.4 coverage=92.4187725631769)
CHLO_4_2532_5
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

2981..3313
DNA (333bp) protein (111aa)
hypothetical protein; K09720 hypothetical protein Tax=RBG_13_Chloroflexi_52_14_curated
hypothetical protein
Transcriptional regulator of nitrogen assimilation n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VH9_METBU (db=UNIREF evalue=4.9e-13 bit_score=79.7 identity=51.3 coverage=67.56756756756756)
CHLO_4_2532_6

Not on your lists

3279..3851
DNA (573bp) protein (191aa)
Marine sediment metagenome DNA, contig: S01H1_S26091 {ECO:0000313|EMBL:GAG40167.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein n=5 Tax=Dehalococcoides mccartyi RepID=A5FQT6_DEHSB (db=UNIREF evalue=2.0e-51 bit_score=208.0 identity=52.4 coverage=97.38219895287958)
CHLO_4_2532_7
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

4244..4639
DNA (396bp) protein (132aa)
id=17494609 Tax=RBG_13_Chloroflexi_60_13_curated
4244..4639 + ( gc_cont=0.684)
CHLO_4_2532_8
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(4652..5284)
DNA (633bp) protein (211aa)
RNA polymerase sigma factor WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RBG_13_Chloroflexi_60_13_curated
RNA polymerase sigma factor n=1 Tax=Treponema phagedenis F0421 RepID=E7NX38_TREPH (db=UNIREF evalue=9.0e-08 bit_score=63.2 identity=30.1 coverage=52.60663507109005)
whiG; DNA-directed RNA polymerase sigma subunit WhiG
CHLO_4_2532_9

Not on your lists

5435..6580
DNA (1146bp) protein (382aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM23772.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
CBS domain containing protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1P4_SPHTD (db=UNIREF evalue=7.4e-85 bit_score=320.1 identity=43.9 coverage=99.21465968586386)
CHLO_4_2532_10
unknown

Not on your lists

6679..6741
DNA (63bp) protein (21aa)
6679..6741 + ( gc_cont=0.603)
Displaying 10 items

View Taxonomy