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RBGRP_5

Alias: scaffold_38

Search features with annotation key words

Displaying items 1-30 of 363 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_5_1
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(289..1296)
DNA (1008bp) protein (336aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QZL1_METFO
hypothetical protein
RBGRP_5_2
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

2205..2489
DNA (285bp) protein (95aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FLA1_9EURY
RBGRP_5_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2755..3513)
DNA (759bp) protein (253aa)
Marine sediment metagenome DNA, contig: S12H4_C05885 Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3622..4023)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=F3AIT5_9FIRM
hypothetical protein
RBGRP_5_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4099..4671)
DNA (573bp) protein (191aa)
Marine sediment metagenome DNA, contig: S01H4_S08546 Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4756..5775)
DNA (1020bp) protein (340aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W035_UNCMA
RBGRP_5_7
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5895..6320)
DNA (426bp) protein (142aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
Conserved Archaeal protein n=1 Tax=Sulfolobus acidocaldarius DSM 639 RepID=Q4JCL8_SULAC
RBGRP_5_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

6389..7075
DNA (687bp) protein (229aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Bathyarchaeota_48_13_curated
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=PIMT_HYPBU
RBGRP_5_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7093..8136)
DNA (1044bp) protein (348aa)
flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=RBG_16_Bathyarchaeota_48_13_curated
flap structure-specific endonuclease
Flap endonuclease 1 n=1 Tax=Pyrolobus fumarii 1A RepID=G0EEE0_PYRF1
RBGRP_5_10
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8210..8452)
DNA (243bp) protein (81aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8482..10659)
DNA (2178bp) protein (726aa)
ATPase AAA Tax=RBG_16_Bathyarchaeota_48_13_curated
ATPase AAA
AAA family ATPase, CDC48 subfamily n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWY4_THEPD
RBGRP_5_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

11166..11498
DNA (333bp) protein (111aa)
Carotene 7,8-desaturase (EC:1.3.5.6); K02293 15-cis-phytoene desaturase [EC:1.3.5.5] Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein; K00274 monoamine oxidase [EC:1.4.3.4]
amine oxidase n=1 Tax=Streptomyces acidiscabies 84-104 RepID=UPI0002895FD0
RBGRP_5_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

11525..11779
DNA (255bp) protein (85aa)
Carotene 7,8-desaturase (EC:1.3.5.6); K02293 15-cis-phytoene desaturase [EC:1.3.5.5] Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_14
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

11826..12455
DNA (630bp) protein (210aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12593..12880)
DNA (288bp) protein (96aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
RBGRP_5_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13223..14218)
DNA (996bp) protein (332aa)
glyoxylate reductase (EC:1.1.1.26); K00015 glyoxylate reductase [EC:1.1.1.26] Tax=RBG_16_Bathyarchaeota_48_13_curated
glyoxylate reductase (EC:1.1.1.26)
Glyoxylate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=GYAR_KORCO
RBGRP_5_17
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14345..14614)
DNA (270bp) protein (90aa)
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
Elongation factor 1-beta n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=EF1B_HYPBU
ef1B; elongation factor 1-beta
RBGRP_5_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

14992..16143
DNA (1152bp) protein (384aa)
geranylgeranyl reductase Tax=RBG_16_Bathyarchaeota_48_13_curated
geranylgeranyl reductase
Geranylgeranyl reductase n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WMV9_METH6
RBGRP_5_19
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16175..16540
DNA (366bp) protein (122aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_16_Bathyarchaeota_48_13_curated
peptidyl-tRNA hydrolase
Peptidyl-tRNA hydrolase n=1 Tax=Pyrococcus yayanosii CH1 RepID=F8AH27_PYRYC
RBGRP_5_20
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

16554..17912
DNA (1359bp) protein (453aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=RBG_16_Bathyarchaeota_48_13_curated
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Methanosaeta thermophila PT RepID=A0B667_METTP
RBGRP_5_21
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18239..19312)
DNA (1074bp) protein (358aa)
ino1; myo-inositol-1-phosphate synthase (EC:5.5.1.4) Tax=RBG_16_Bathyarchaeota_48_13_curated
ino1; myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase n=1 Tax=Candidatus Nitrososphaera gargensis Ga9.2 RepID=K0IIH4_NITGG
RBGRP_5_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

19452..20366
DNA (915bp) protein (305aa)
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RBG_16_Bathyarchaeota_48_13_curated
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL62_THEYD
RBGRP_5_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20363..21838)
DNA (1476bp) protein (492aa)
Fe-S oxidoreductase; K06937 Tax=RBG_16_Bathyarchaeota_48_13_curated
Fe-S oxidoreductase
Molybdenum cofactor biosynthesis MoaA homolog n=2 Tax=Methanothermobacter RepID=O26919_METTH
RBGRP_5_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

21866..22693
DNA (828bp) protein (276aa)
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
transcriptional regulator, TrmB-like
Transcriptional regulator, TrmB-like n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6N3_9ARCH
RBGRP_5_25
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

22773..23183
DNA (411bp) protein (137aa)
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RBG_16_Bathyarchaeota_48_13_curated
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZ23_HALOH
RBGRP_5_26
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

23287..24435
DNA (1149bp) protein (383aa)
sugar transporter Tax=RBG_16_Bathyarchaeota_48_13_curated
sugar transporter
Putative sugar transporter n=2 Tax=Salinibacter ruber RepID=Q2S5M0_SALRD
RBGRP_5_27
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(24635..25435)
DNA (801bp) protein (267aa)
gdh; glucose 1-dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
gdh; glucose 1-dehydrogenase
Glucose 1-dehydrogenase n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I7T8_CALAS
RBGRP_5_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

25579..26241
DNA (663bp) protein (221aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=RBG_16_Bathyarchaeota_48_13_curated
OB-fold nucleic acid binding domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAS7_9CREN
replication factor A1
RBGRP_5_29
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

26458..27459
DNA (1002bp) protein (334aa)
5,10-methylenetetrahydromethanopterin reductase; K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=RBG_16_Bathyarchaeota_48_13_curated
5,10-methylenetetrahydromethanopterin reductase
5,10-methylenetetrahydromethanopterin reductase n=6 Tax=Methanocaldococcaceae RepID=MER_METJA
RBGRP_5_30
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

27582..28739
DNA (1158bp) protein (386aa)
iron-containing alcohol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase n=3 Tax=Chloroflexus RepID=A9WJG6_CHLAA
Displaying items 1-30 of 363 in total

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