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RBGRP_13

Alias: scaffold_388

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_13_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..3132)
DNA (3132bp) protein (1044aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RBGRP_13_2
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3402..6476)
DNA (3075bp) protein (1025aa)
Ig-like protein {ECO:0000313|EMBL:EMY27830.1}; TaxID=1085541 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serovar Australis str. 2007032
Ig-like protein n=14 Tax=Leptospira RepID=J5G9E5_LEPIR
RBGRP_13_3
Colletotrichum orbiculare, Colletotrichum, Glomerellales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(6749..7225)
DNA (477bp) protein (159aa)
NV17977; putative RNA-binding protein Luc7-like 2-like
Uncharacterized protein n=1 Tax=Nasonia vitripennis RepID=K7J9A8_NASVI
Kinase phosphorylation protein {ECO:0000313|EMBL:ENH87462.1}; TaxID=1213857 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerell
RBGRP_13_4
unknown

Not on your lists

7385..7984
DNA (600bp) protein (200aa)

This feature has no annotations

RBGRP_13_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8144..8830
DNA (687bp) protein (229aa)
radB; DNA repair and recombination protein RadB Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IA62_ACIB4
RBGRP_13_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8814..9920)
DNA (1107bp) protein (369aa)
Bifunctional short chain isoprenyl diphosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
geranylgeranyl pyrophosphate synthetase (EC:2.5.1.1)
Geranylgeranyl pyrophosphate synthetase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BK89_HYPBU
RBGRP_13_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9917..10990)
DNA (1074bp) protein (358aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
isopentenyl pyrophosphate isomerase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E0F6
RBGRP_13_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

11140..12651
DNA (1512bp) protein (504aa)
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein
metal-binding integral membrane protein-like protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A5155
RBGRP_13_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12675..13298)
DNA (624bp) protein (208aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58274.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
Uncharacterized protein n=1 Tax=Candidatus Nitrososphaera gargensis Ga9.2 RepID=K0IMV3_NITGG
RBGRP_13_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13438..13941
DNA (504bp) protein (168aa)
rpl10e; 50S ribosomal protein L10AE; K02866 large subunit ribosomal protein L10e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L16
50S ribosomal protein L10e n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RX71_FERPA
RBGRP_13_11
unknown

Not on your lists

comp(14143..14640)
DNA (498bp) protein (166aa)

This feature has no annotations

RBGRP_13_12
unknown

Not on your lists

comp(14653..14883)
DNA (231bp) protein (77aa)

This feature has no annotations

RBGRP_13_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

15019..15993
DNA (975bp) protein (325aa)
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
universal diphthamide biosynthesis domain-containing protein
Universal diphthamide biosynthesis domain-containing protein n=1 Tax=Methanobacterium sp. AL-21 RepID=F0T7W3_METSL
RBGRP_13_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

16085..16915
DNA (831bp) protein (277aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Roadblock/LC7 family protein
Roadblock/LC7 family protein n=1 Tax=Deinococcus maricopensis DSM 21211 RepID=E8U4E1_DEIML
RBGRP_13_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16955..17653
DNA (699bp) protein (233aa)
exsB protein; K06920 queuosine biosynthesis protein QueC Tax=RBG_16_Euryarchaeota_67_27_curated
exsB protein
7-cyano-7-deazaguanine synthase n=1 Tax=Aciduliprofundum boonei T469 RepID=B5I9Q6_ACIB4
RBGRP_13_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

17679..18407
DNA (729bp) protein (243aa)
putative radical activating enzyme; K10026 queuosine biosynthesis protein QueE Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
radical SAM domain-containing protein
7-carboxy-7-deazaguanine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2N6_ACIC5
RBGRP_13_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18446..18853
DNA (408bp) protein (136aa)
archease Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
Protein archease n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IGK6_ACIB4
RBGRP_13_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

18863..19603
DNA (741bp) protein (247aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
HAD family hydrolase
Putative hydrolase (HAD superfamily) n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W5S3_UNCMA
RBGRP_13_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19591..20559
DNA (969bp) protein (323aa)
mvd; diphosphomevalonate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
diphosphomevalonate decarboxylase
Diphosphomevalonate decarboxylase n=1 Tax=Halalkalicoccus jeotgali B3 RepID=D8J4Z7_HALJB
RBGRP_13_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

20599..21237
DNA (639bp) protein (213aa)
adk; adenylate kinase Adk (EC:2.7.4.3) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
adenylate kinase
Adenylate kinase n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8AA58_THEID
RBGRP_13_21
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21283..21585
DNA (303bp) protein (101aa)
small GTP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
RBGRP_13_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

21686..22321
DNA (636bp) protein (212aa)
proteasome endopeptidase complex, beta subunit (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_16_Euryarchaeota_67_27_curated
proteasome endopeptidase complex, beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Aciduliprofundum boonei T469 RepID=PSB_ACIB4
RBGRP_13_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22363..24270
DNA (1908bp) protein (636aa)
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
KH-domain/beta-lactamase-domain protein n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IEE4_ACIB4
RBGRP_13_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

24302..24763
DNA (462bp) protein (154aa)
nucleic acid-binding OB-fold tRNA/helicase-type protein; K07466 replication factor A1 Tax=RBG_16_Euryarchaeota_67_27_curated
replication factor A
Nucleic acid binding, OB-fold, tRNA/helicase-type n=1 Tax=Methanosaeta thermophila PT RepID=A0B7K0_METTP
RBGRP_13_25
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

24827..25588
DNA (762bp) protein (254aa)
gufA; gufA protein; K07238 zinc transporter, ZIP family Tax=RBG_16_Euryarchaeota_67_27_curated
Putative divalent heavy-metal cations transporter n=1 Tax=Acidovorax sp. CF316 RepID=J0KFJ4_9BURK
metal transporter
RBGRP_13_26
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

25664..25984
DNA (321bp) protein (107aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
RBGRP_13_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(26004..27674)
DNA (1671bp) protein (557aa)
thermosome Tax=RBG_16_Euryarchaeota_68_13_curated
thermosome
Thermosome, multiple subunit protein, archaeal subfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAW1_ACIB4
RBGRP_13_28
unknown

Not on your lists

27823..27975
DNA (153bp) protein (51aa)

This feature has no annotations

RBGRP_13_29

Not on your lists


28196..29200
DNA (1005bp) protein (335aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl3p; 50S ribosomal protein L3P
50S ribosomal protein L3P n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI7_ACIB4
RBGRP_13_30

Not on your lists


29203..30042
DNA (840bp) protein (280aa)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS13099.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl4lp; 50S ribosomal protein L4P
Ribosomal protein L4/L1 family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI8_ACIB4
Displaying items 1-30 of 93 in total

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