ggKbase home page

RBGRP_16

Alias: scaffold_621

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_16_1
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

134..352
DNA (219bp) protein (73aa)
ribbon-helix-helix protein Tax=RBG_16_Spirochaetes_49_21_curated
ribbon-helix-helix protein
Ribbon-helix-helix protein n=3 Tax=Leptospira borgpetersenii RepID=Q04R93_LEPBJ
RBGRP_16_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

349..744
DNA (396bp) protein (132aa)
protein of unknown function DUF132 Tax=RBG_13_Caldithrix_44_9_curated
nucleic acid-binding protein
Nucleic acid-binding protein n=2 Tax=Leptospira borgpetersenii serovar Hardjo-bovis RepID=Q04R92_LEPBJ
RBGRP_16_3
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

1212..1325
DNA (114bp) protein (38aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_4
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(1455..1655)
DNA (201bp) protein (67aa)
cold-shock DNA-binding protein family Tax=RBG_16_Spirochaetes_49_21_curated
Cold-shock protein n=2 Tax=Fusobacterium RepID=C6JI25_FUSVA
cold-shock DNA-binding protein family
RBGRP_16_5
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(1995..2840)
DNA (846bp) protein (282aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_6
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

2986..3756
DNA (771bp) protein (257aa)
transcriptional regulator, TetR family Tax=RBG_16_Spirochaetes_49_21_curated
transcriptional regulator, TetR family
Transcriptional regulator, TetR family n=1 Tax=Turneriella parva DSM 21527 RepID=I4B5K3_TURPD
RBGRP_16_7
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

3771..5393
DNA (1623bp) protein (541aa)
TolC-like protein Tax=RBG_16_Spirochaetes_49_21_curated
TolC-like protein
TolC-like protein n=1 Tax=Turneriella parva DSM 21527 RepID=I4B5G5_TURPD
RBGRP_16_8
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

5592..7655
DNA (2064bp) protein (688aa)
PAS/PAC sensor protein Tax=RBG_16_Spirochaetes_49_21_curated
PAS/PAC sensor protein
Putative PAS/PAC sensor protein n=1 Tax=Methylomicrobium alcaliphilum 20Z RepID=G4T2Z1_META2
RBGRP_16_9
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(7554..7778)
DNA (225bp) protein (75aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_10
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

7916..8179
DNA (264bp) protein (88aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_11
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(8054..9727)
DNA (1674bp) protein (558aa)
hypothetical protein Tax=RBG_16_Spirochaetes_49_21_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sorangium cellulosum So ce56 RepID=A9GS07_SORC5
RBGRP_16_12
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(9740..15655)
DNA (5916bp) protein (1972aa)
putative PAS/PAC sensor protein Tax=RBG_16_Spirochaetes_49_21_curated
putative PAS/PAC sensor protein
Putative PAS/PAC sensor protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=E0UIS3_CYAP2
RBGRP_16_13
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

15817..16314
DNA (498bp) protein (166aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_14
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(16383..16844)
DNA (462bp) protein (154aa)
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] Tax=RBG_16_Spirochaetes_49_21_curated
Phosphohistidine phosphatase SixA n=1 Tax=delta proteobacterium NaphS2 RepID=D8FCH6_9DELT
phosphohistidine phosphatase SixA
RBGRP_16_15
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

17372..18532
DNA (1161bp) protein (387aa)
peptidase S1 and S6 chymotrypsin/Hap Tax=RBG_16_Spirochaetes_49_21_curated
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Leptonema illini DSM 21528 RepID=H2CBR0_9LEPT
peptidase S1 and S6 chymotrypsin/Hap
RBGRP_16_16
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

18746..19180
DNA (435bp) protein (145aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Spirochaetes_49_21_curated
heat shock protein Hsp20
Heat shock protein Hsp20 n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3P8J5_DEFDS
RBGRP_16_17
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

19339..19827
DNA (489bp) protein (163aa)
phospholipase/Carboxylesterase Tax=RBG_16_Spirochaetes_49_21_curated
phospholipase/Carboxylesterase
Phospholipase/Carboxylesterase n=1 Tax=Aciduliprofundum boonei T469 RepID=B5ID27_ACIB4
RBGRP_16_18
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

19838..20746
DNA (909bp) protein (303aa)
HhH-GPD; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_Spirochaetes_49_21_curated
endonuclease III family protein
HhH-GPD family protein n=2 Tax=Geobacter metallireducens RepID=H1L1Y2_GEOME
RBGRP_16_19
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(20752..21261)
DNA (510bp) protein (170aa)
polynucleotide kinase domain protein Tax=RBG_16_Spirochaetes_49_21_curated
polynucleotide kinase domain-containing protein
RBGRP_16_20
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

21467..22696
DNA (1230bp) protein (410aa)
amidohydrolase Tax=RBG_16_Spirochaetes_49_21_curated
chlorohydrolase n=2 Tax=Leptospira RepID=UPI000289CCED
amidohydrolase
RBGRP_16_21
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

22709..23911
DNA (1203bp) protein (401aa)
putative transcriptional regulator, Crp/Fnr family Tax=RBG_16_Spirochaetes_49_21_curated
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptonema illini DSM 21528 RepID=H2CCM2_9LEPT
putative transcriptional regulator, Crp/Fnr family
RBGRP_16_22
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

23916..24566
DNA (651bp) protein (217aa)
putative transcriptional regulator, Crp/Fnr family Tax=RBG_16_Spirochaetes_49_21_curated
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Leptonema illini DSM 21528 RepID=H2CCM3_9LEPT
putative transcriptional regulator, Crp/Fnr family
RBGRP_16_23
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

24767..25837
DNA (1071bp) protein (357aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RBG_16_Spirochaetes_49_21_curated
prfA; peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J9B9_DESRM
RBGRP_16_24
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

25851..26687
DNA (837bp) protein (279aa)
hemK; peptide chain release factor methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_16_Spirochaetes_49_21_curated
Release factor glutamine methyltransferase n=2 Tax=Geobacter RepID=B5EDS2_GEOBB
hemK; peptide chain release factor methyltransferase
RBGRP_16_25
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

26695..28047
DNA (1353bp) protein (451aa)
Tax=RBG_16_Spirochaetes_49_21_curated
RBGRP_16_26
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(28010..28645)
DNA (636bp) protein (212aa)
DNA-(apurinic or apyrimidinic site) lyase; K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Spirochaetes_49_21_curated
Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase) n=2 Tax=mine drainage metagenome RepID=E6PGL9_9ZZZZ
DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
RBGRP_16_27
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(28932..29525)
DNA (594bp) protein (198aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RBG_16_Spirochaetes_49_21_curated
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CP63_DESK7
RBGRP_16_28
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

29791..31833
DNA (2043bp) protein (681aa)
GAF sensor signal transduction histidine kinase Tax=RBG_16_Spirochaetes_49_21_curated
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IGK8_9PLAN
GAF sensor signal transduction histidine kinase
RBGRP_16_29
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

32079..32438
DNA (360bp) protein (120aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RBG_16_Spirochaetes_49_21_curated
Similar to two component response regulator n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6L0_9BACT
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
RBGRP_16_30
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(32523..32696)
DNA (174bp) protein (58aa)
Tax=RBG_16_Spirochaetes_49_21_curated
Displaying items 1-30 of 107 in total

View Taxonomy