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RBGRP_29

Alias: scaffold_1243

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_29_1
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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177..551
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
30S ribosomal protein S12 n=2 Tax=Deferribacteraceae RepID=D3P942_DEFDS
RBGRP_29_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


554..1024
DNA (471bp) protein (157aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Actinobacteria_68_12_curated
30S ribosomal protein S7 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEU1_CONWI
30S ribosomal protein S7
RBGRP_29_3
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1113..3188
DNA (2076bp) protein (692aa)
fusA; elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
Elongation factor G n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=EFG_MOOTA
RBGRP_29_4
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3344..4552
DNA (1209bp) protein (403aa)
translation elongation factor 1A (EF-1A/EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanae
Elongation factor Tu n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZL0_THEOJ
RBGRP_29_5
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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4637..4945
DNA (309bp) protein (103aa)
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S10
30S ribosomal protein S10 n=2 Tax=Solirubrobacterales RepID=H0E8N9_9ACTN
RBGRP_29_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


4952..5572
DNA (621bp) protein (207aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibact
50S ribosomal protein L3 n=1 Tax=Patulibacter sp. I11 RepID=H0E8P0_9ACTN
50S ribosomal protein L3
RBGRP_29_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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5569..6765
DNA (1197bp) protein (399aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXD0_9FIRM
RBGRP_29_8
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists


6768..7055
DNA (288bp) protein (96aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_13_Actinobacteria_55_18_curated
ribosomal protein L25/L23
50S ribosomal protein L23 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEU7_CONWI
RBGRP_29_9
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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7056..7889
DNA (834bp) protein (278aa)
Tax=BJP_08E140C01_Coriobacteriales_62_12
50S ribosomal protein L2P
50S ribosomal protein L2 n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZL5_THEOJ
RBGRP_29_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7915..8193
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RS19_RUBXD
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
RBGRP_29_11
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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8197..8541
DNA (345bp) protein (115aa)
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix oreni
50S ribosomal protein L22 n=1 Tax=Halothermothrix orenii H 168 RepID=RL22_HALOH
RBGRP_29_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8541..9293
DNA (753bp) protein (251aa)
30S ribosomal protein S3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEV1_CONWI
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacte
RBGRP_29_13
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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9305..9730
DNA (426bp) protein (142aa)
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source
50S ribosomal protein L16 n=1 Tax=Thermincola potens JR RepID=D5XA90_THEPJ
RBGRP_29_14
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9720..9929
DNA (210bp) protein (70aa)
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
50S ribosomal protein L29 n=2 Tax=Thermaerobacter RepID=E6SKZ2_THEM7
RBGRP_29_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9929..10402
DNA (474bp) protein (158aa)
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
30S ribosomal protein S17 n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R275_9MICO
30S ribosomal protein S17P
RBGRP_29_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


10425..10793
DNA (369bp) protein (123aa)
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Con
50S ribosomal protein L14 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEV5_CONWI
RBGRP_29_17
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10833..11168
DNA (336bp) protein (112aa)
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter
50S ribosomal protein L24 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RL24_PELCD
RBGRP_29_18
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11181..11723
DNA (543bp) protein (181aa)
50S ribosomal protein L5
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
50S ribosomal protein L5 n=5 Tax=Gammaproteobacteria RepID=F7NWQ9_9GAMM
RBGRP_29_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


11734..11919
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Actinobacteria_68_12_curated
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 type Z n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RS14Z_RUBXD
RBGRP_29_20
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


11932..12330
DNA (399bp) protein (133aa)
Ribosomal protein S8 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S8
30S ribosomal protein S8 n=3 Tax=Acidaminococcus RepID=D2RMG5_ACIFV
RBGRP_29_21
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


12341..12874
DNA (534bp) protein (178aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Actinobacteria_63_9_curated
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEW0_CONWI
RBGRP_29_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12904..13254
DNA (351bp) protein (117aa)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
50S ribosomal protein L18 n=2 Tax=Clostridiales RepID=G9YVZ3_9FIRM
hypothetical protein
RBGRP_29_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


13276..13833
DNA (558bp) protein (186aa)
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibact
30S ribosomal protein S5 n=1 Tax=Patulibacter sp. I11 RepID=H0E8Q7_9ACTN
30S ribosomal protein S5
RBGRP_29_24
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13837..14031
DNA (195bp) protein (65aa)
50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source
50S ribosomal protein L30 n=1 Tax=Thermincola potens JR RepID=D5XAA1_THEPJ
RBGRP_29_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


14034..14510
DNA (477bp) protein (159aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYR4_CONWI
RBGRP_29_26
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


14576..15835
DNA (1260bp) protein (420aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Actinobacteria_64_13_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Patulibacter sp. I11 RepID=H0E8R0_9ACTN
RBGRP_29_27
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15855..16421
DNA (567bp) protein (189aa)
adenylate kinase
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=2 Tax=Kurthia RepID=UPI000287EBC8
RBGRP_29_28
unknown

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16443..16556
DNA (114bp) protein (38aa)

This feature has no annotations

RBGRP_29_29
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

16553..17344
DNA (792bp) protein (264aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Actinobacteria_64_13_curated
Methionine aminopeptidase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU51_RUBXD
methionine aminopeptidase (EC:3.4.11.18)
RBGRP_29_30
unknown

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17350..17454
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying items 1-30 of 58 in total

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