ggKbase home page

RBGRP_32

Alias: scaffold_1449

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_32_1
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1..234
DNA (234bp) protein (78aa)
Marine sediment metagenome DNA, contig: S01H4_C02124 Tax=RBG_16_Actinobacteria_64_13_curated
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJQ8_9FIRM
RBGRP_32_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

260..961
DNA (702bp) protein (234aa)
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
Putative uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ94_9BACT
hypothetical protein
RBGRP_32_3
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1107..2597
DNA (1491bp) protein (497aa)
vinylacetyl-CoA Delta-isomerase Tax=RBG_16_Actinobacteria_64_13_curated
Vinylacetyl-CoA Delta-isomerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FLD4_DESAA
vinylacetyl-CoA Delta-isomerase
RBGRP_32_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2679..4958
DNA (2280bp) protein (760aa)
acetyl-CoA synthetase subunit beta Tax=RBG_16_Actinobacteria_64_13_curated
acetyl-CoA synthetase subunit beta
Acetyl-CoA synthetase beta subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVD4_SYNAS
RBGRP_32_5
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5238..6119
DNA (882bp) protein (294aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Actinobacteria_64_13_curated
inner-membrane translocator
Branched-chain amino acid ABC-type transport system, permease components n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FS82_RHOMO
RBGRP_32_6
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6119..8923
DNA (2805bp) protein (935aa)
ABC transporter Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter
ABC transporter related protein n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SIA5_THEM7
RBGRP_32_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8999..10288
DNA (1290bp) protein (430aa)
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter substrate-binding protein
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTB9_ACIC1
RBGRP_32_8
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10502..11272
DNA (771bp) protein (257aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) Tax=RBG_16_Actinobacteria_64_13_curated
oxidoreductase
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. H160 RepID=B5WAN4_9BURK
RBGRP_32_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11329..11802
DNA (474bp) protein (158aa)
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM44_9PROT
phosphoserine aminotransferase
RBGRP_32_10
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11829..12686
DNA (858bp) protein (286aa)
Ethyl tert-butyl ether degradation EthD Tax=RBG_16_Actinobacteria_64_13_curated
Ethyl tert-butyl ether degradation EthD n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4S5_9BACT
RBGRP_32_11
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12700..13446)
DNA (747bp) protein (249aa)
GntR family transcriptional regulator Tax=RBG_16_Actinobacteria_64_13_curated
GntR family transcriptional regulator
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans CB1190 RepID=F4CLK2_PSEUX
RBGRP_32_12
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13613..14860
DNA (1248bp) protein (416aa)
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
LVIVD repeat-containing protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P279_9BACT
hypothetical protein
RBGRP_32_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15088..17265
DNA (2178bp) protein (726aa)
acetyl-CoA synthetase subunit beta Tax=RBG_16_Actinobacteria_64_13_curated
acetyl-CoA synthetase subunit beta rbh
Acetyl-CoA synthetase beta subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVD4_SYNAS
RBGRP_32_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17277..19121
DNA (1845bp) protein (615aa)
indolepyruvate ferredoxin oxidoreductase subunit alpha; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RBG_16_Actinobacteria_64_13_curated
indolepyruvate ferredoxin oxidoreductase subunit alpha
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Geobacter daltonii FRC-32 RepID=B9M225_GEOSF
RBGRP_32_15
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19121..19738
DNA (618bp) protein (206aa)
pyruvate ferredoxin/flavodoxin oxidoreductase; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] Tax=RBG_16_Actinobacteria_64_13_curated
pyruvate ferredoxin/flavodoxin oxidoreductase
Indolepyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PW84_9BACT
RBGRP_32_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19738..21096
DNA (1359bp) protein (453aa)
sugar phosphate permease Tax=RBG_16_Actinobacteria_64_13_curated
sugar phosphate permease
Major facilitator superfamily MFS_1 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I603_9FIRM
RBGRP_32_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21132..21500
DNA (369bp) protein (123aa)
glyoxalase/bleomycin resistance protein/dioxygenase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] Tax=RBG_16_Actinobacteria_64_13_curated
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P362_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
RBGRP_32_18
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21641..23860)
DNA (2220bp) protein (740aa)
molybdopterin oxidoreductase, molybdopterin binding subunit; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=RBG_16_Actinobacteria_64_13_curated
Anaerobic dehydrogenase, typically selenocysteine-containing
Molybdopterin oxidoreductase, molybdopterin binding subunit n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O29065_ARCFU
RBGRP_32_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23889..24854)
DNA (966bp) protein (322aa)
padX1; molybdopterin oxidoreductase membrane anchor PadX Tax=RBG_16_Actinobacteria_64_13_curated
padX1; molybdopterin oxidoreductase membrane anchor PadX
PadX1: probable membrane anchor for molybdopterin oxidoreductase PadBC n=1 Tax=Desulfobacula toluolica Tol2 RepID=K0NCJ8_DESTT
RBGRP_32_20
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24871..25644)
DNA (774bp) protein (258aa)
padC1; phenylacetyl-CoA:acceptor oxidoreductase subunit C PadC1 (EC:1.17.5.1) Tax=RBG_16_Actinobacteria_64_13_curated
padC1; phenylacetyl-CoA:acceptor oxidoreductase subunit C PadC1 (EC:1.17.5.1)
PadC1: phenylacetyl-CoA:acceptor oxidoreductase, subunit C n=1 Tax=Desulfobacula toluolica Tol2 RepID=K0NFD2_DESTT
RBGRP_32_21
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25903..26721)
DNA (819bp) protein (273aa)
putative ABC transporter integral membrane protein Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter membrane protein n=3 Tax=Streptomyces clavuligerus ATCC 27064 RepID=E2Q268_STRC2
putative ABC transporter integral membrane protein
RBGRP_32_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26718..27737)
DNA (1020bp) protein (340aa)
ABC transporter, ATP-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein n=1 Tax=Melioribacter roseus P3M RepID=I6ZYJ2_MELRP
RBGRP_32_23
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

27940..28860
DNA (921bp) protein (307aa)
inner-membrane translocator Tax=RBG_16_Actinobacteria_64_13_curated
inner-membrane translocator
Inner-membrane translocator n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D6Q1_BACAZ
RBGRP_32_24
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

28860..29930
DNA (1071bp) protein (357aa)
amino acid ABC transporter; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Actinobacteria_64_13_curated
amino acid ABC transporter
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfitobacterium dichloroeliminans LMG P-21439 RepID=H1IEE4_9FIRM
RBGRP_32_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

29914..30678
DNA (765bp) protein (255aa)
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
ABC transporter permease
ABC transporter permease protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L5F4_THERP
RBGRP_32_26
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

30686..31390
DNA (705bp) protein (235aa)
livF3; high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Actinobacteria_64_13_curated
livF3; high-affinity branched-chain amino acid transport ATP-binding protein LivF
High-affinity branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Cupriavidus necator N-1 RepID=F8GVN7_CUPNN
RBGRP_32_27
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

31440..32690
DNA (1251bp) protein (417aa)
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_Zixibacteria_53_22_curated
hypothetical protein
Putative ABC transporter substrate binding protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9HZ89_BORPD
RBGRP_32_28
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

32721..33848
DNA (1128bp) protein (376aa)
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_16_Actinobacteria_64_13_curated
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLH7_9FIRM
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
RBGRP_32_29
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

33868..34722
DNA (855bp) protein (285aa)
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TK30_ALKMQ
RBGRP_32_30
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

34772..35545
DNA (774bp) protein (258aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] Tax=RBG_16_Actinobacteria_64_13_curated
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLF5_9FIRM
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 120 in total

View Taxonomy