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RBGRP_33

Alias: scaffold_1794

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_33_1
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
BisC; anaerobic dehydrogenase; K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3] Tax=RBG_16_Actinobacteria_64_13_curated
Molybdopterin dinucleotide-binding region n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NVS8_9BACT
anaerobic dehydrogenase
RBGRP_33_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228..1022)
DNA (795bp) protein (265aa)
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Actinobacteria_64_13_curated
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU61_RUBXD
RBGRP_33_3
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1140..1490)
DNA (351bp) protein (117aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SH74_GEOOG
RBGRP_33_4
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1492..1968)
DNA (477bp) protein (159aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Actinobacteria_64_13_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYS1_CONWI
RBGRP_33_5
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1913..2446)
DNA (534bp) protein (178aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Actinobacteria_64_13_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYS1_CONWI
RBGRP_33_6
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2660..3088)
DNA (429bp) protein (143aa)
ribosomal protein S4, bacterial/organelle type Tax=RBG_16_Actinobacteria_64_13_curated
ribosomal protein S4, bacterial/organelle type
30S ribosomal protein S4 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I6D4_9FIRM
RBGRP_33_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3103..3492)
DNA (390bp) protein (130aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYS0_CONWI
RBGRP_33_8
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3539..3916)
DNA (378bp) protein (126aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_13_Actinobacteria_63_9_curated
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RS13_MOOTA
RBGRP_33_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3930..4043)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Pa
50S ribosomal protein L36
50S ribosomal protein L36 n=2 Tax=Actinobacteria RepID=H0E8R3_9ACTN
RBGRP_33_10
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4058..4279)
DNA (222bp) protein (74aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Actinobacteria_64_13_curated
translation initiation factor IF-1
Translation initiation factor IF-1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QYE5_CHLT3
RBGRP_33_11
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4345..5193)
DNA (849bp) protein (283aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Actinobacteria_64_13_curated
methionine aminopeptidase
Methionine aminopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYR7_CONWI
RBGRP_33_12
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5144..5806)
DNA (663bp) protein (221aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Actinobacteria_64_13_curated
adenylate kinase
Adenylate kinase n=1 Tax=Archaeoglobus veneficus SNP6 RepID=F2KT72_ARCVS
RBGRP_33_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5838..7088)
DNA (1251bp) protein (417aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Actinobacteria_64_13_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYR5_CONWI
RBGRP_33_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7088..7561)
DNA (474bp) protein (158aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3EYR4_CONWI
RBGRP_33_15
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7564..7755)
DNA (192bp) protein (64aa)
50S ribosomal protein L30 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L30 n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RDB6_9RHOO
rpmD; 50S ribosomal protein L30
RBGRP_33_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7760..8302)
DNA (543bp) protein (181aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEW2_CONWI
RBGRP_33_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8320..8676)
DNA (357bp) protein (119aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L18
50S ribosomal protein L18 n=2 Tax=Weissella koreensis RepID=J0MNA3_9LACT
RBGRP_33_18
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8692..9258)
DNA (567bp) protein (189aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_13_Actinobacteria_63_9_curated
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=RL6_SYMTH
RBGRP_33_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9230..9628)
DNA (399bp) protein (133aa)
Ribosomal protein S8 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S8 n=2 Tax=Thermanaerovibrio RepID=H0UQJ9_9BACT
30S ribosomal protein S8
RBGRP_33_20
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9637..9822)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Actinobacteria_64_13_curated
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 type Z n=7 Tax=Coriobacteriaceae RepID=E5XAL8_9ACTN
RBGRP_33_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9841..10389)
DNA (549bp) protein (183aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CKH4_DESK7
RBGRP_33_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10392..10736)
DNA (345bp) protein (115aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Halanaerobium praevalens DSM 2228 RepID=E3DPW0_HALPG
RBGRP_33_23
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10736..11104)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEV5_CONWI
RBGRP_33_24
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11134..11397)
DNA (264bp) protein (88aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEV4_CONWI
RBGRP_33_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11397..11597)
DNA (201bp) protein (67aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=2 Tax=Thermaerobacter RepID=E6SKZ2_THEM7
RBGRP_33_26
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11587..12012)
DNA (426bp) protein (142aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Actinobacteria_64_13_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=3 Tax=Brevibacillus RepID=RL16_BREBN
RBGRP_33_27
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12025..12699)
DNA (675bp) protein (225aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3FEV1_CONWI
30S ribosomal protein S3
RBGRP_33_28
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12703..13041)
DNA (339bp) protein (113aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Actinobacteria_64_13_curated
rplV; ribosomal protein L22
50S ribosomal protein L22 n=38 Tax=Bacillus RepID=RL22_BACLD
RBGRP_33_29
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13045..13329)
DNA (285bp) protein (95aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Actinobacteria_64_13_curated
30S ribosomal protein S19
SSU ribosomal protein S19p (S15e) n=1 Tax=Patulibacter sp. I11 RepID=H0E8P4_9ACTN
RBGRP_33_30
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13339..14172)
DNA (834bp) protein (278aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Actinobacteria_64_13_curated
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RL2_CARHZ
Displaying items 1-30 of 42 in total

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