ggKbase home page

RBGRP_36

Alias: scaffold_1905

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_36_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1..951)
DNA (951bp) protein (317aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_RIF_CHLX_72_14_curated
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C285_SPHTD
RBGRP_36_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(948..1520)
DNA (573bp) protein (191aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_16_RIF_CHLX_72_14_curated
Ribosomal-protein-alanine acetyltransferase n=3 Tax=mine drainage metagenome RepID=E6PCR9_9ZZZZ
putative acetyltransferase
RBGRP_36_3
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1499..2215)
DNA (717bp) protein (239aa)
universal protein YeaZ Tax=RBG_16_RIF_CHLX_69_14_curated
universal protein YeaZ
Universal bacterial protein YeaZ n=2 Tax=Selenomonas RepID=C9LXB6_9FIRM
RBGRP_36_4
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2212..3072)
DNA (861bp) protein (287aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein
Uncharacterized protein family UPF0079, ATPase n=2 Tax=Rhodothermus marinus RepID=G2SIE5_RHOMR
RBGRP_36_5
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(3041..3841)
DNA (801bp) protein (267aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
RBGRP_36_6
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4091..5695)
DNA (1605bp) protein (535aa)
id=14629506 Tax=RBG_16_RIF_CHLX_72_14_curated
RBGRP_36_7
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5781..6071)
DNA (291bp) protein (97aa)
id=4767755 Tax=RBG_16_RIF_CHLX_69_14_curated
RBGRP_36_8
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6068..6595)
DNA (528bp) protein (176aa)
phosphatase Tax=RBG_16_RIF_CHLX_69_14_curated
phosphatase
Predicted phosphatase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D049_PELTS
RBGRP_36_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6599..7849)
DNA (1251bp) protein (417aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_16_RIF_CHLX_69_14_curated
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Thermaerobacter RepID=E6SM56_THEM7
RBGRP_36_10
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7864..8997)
DNA (1134bp) protein (378aa)
carbohydrate kinase Tax=RBG_16_RIF_CHLX_69_14_curated
carbohydrate kinase
Carbohydrate kinase, YjeF related protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K3Q7_DEHLB
RBGRP_36_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8990..9580)
DNA (591bp) protein (197aa)
acpS; holo-ACP synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_RIF_CHLX_69_14_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI99_9CHLR
acpS; holo-ACP synthase (EC:2.7.8.7)
RBGRP_36_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9587..11419)
DNA (1833bp) protein (611aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_16_RIF_CHLX_69_14_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGH0_9CHLR
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
RBGRP_36_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11495..12829)
DNA (1335bp) protein (445aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RBG_16_RIF_CHLX_69_14_curated
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=GLMM_MOOTA
RBGRP_36_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12836..14101)
DNA (1266bp) protein (422aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
Uncharacterized protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I3B5_CALAS
hypothetical protein
RBGRP_36_15
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14098..15135)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
Putative uncharacterized protein n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WS89_BACT2
hypothetical protein
RBGRP_36_16
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15186..16094)
DNA (909bp) protein (303aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_69_14_curated
hypothetical protein
Polypeptide N-acetylglucosaminyltransferase n=1 Tax=Azospirillum sp. B510 RepID=D3P0C0_AZOS1
RBGRP_36_17
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16091..17047)
DNA (957bp) protein (319aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RBG_16_RIF_CHLX_69_14_curated
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR1_9BACT
RBGRP_36_18
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(17209..17607)
DNA (399bp) protein (133aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_RIF_CHLX_69_14_curated
30S ribosomal protein S9
Ribosomal protein S9 n=2 Tax=Thermaerobacter RepID=K6PPN3_9FIRM
RBGRP_36_19
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(17625..18056)
DNA (432bp) protein (144aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_16_RIF_CHLX_69_14_curated
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=RL13_SYMTH
RBGRP_36_20
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18053..18799)
DNA (747bp) protein (249aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_RIF_CHLX_69_14_curated
truA; tRNA pseudouridine synthase A
tRNA pseudouridine synthase A n=2 Tax=Geobacter metallireducens RepID=H1LBF8_GEOME
RBGRP_36_21
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(18843..19196)
DNA (354bp) protein (118aa)
LSU ribosomal protein L17P Tax=RBG_16_RIF_CHLX_69_14_curated
50S ribosomal protein L17
50S ribosomal protein L17 n=6 Tax=Pelosinus fermentans RepID=I8RNL7_9FIRM
RBGRP_36_22
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19200..20189)
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_RIF_CHLX_69_14_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB7_9CHLR
DNA-directed RNA polymerase subunit alpha
RBGRP_36_23
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(20199..20825)
DNA (627bp) protein (209aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_RIF_CHLX_69_14_curated
30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X450_DESRD
RBGRP_36_24
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(20839..21234)
DNA (396bp) protein (132aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_RIF_CHLX_69_14_curated
30S ribosomal protein S11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB9_9CHLR
30S ribosomal protein S11
RBGRP_36_25
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists


comp(21356..21625)
DNA (270bp) protein (90aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CSP1_4_Chloroflexi
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=2 Tax=Peptococcaceae RepID=RS13_PELTS
RBGRP_36_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(21774..21992)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_RIF_CHLX_69_14_curated
Translation initiation factor IF-1 n=5 Tax=Bacillales RepID=IF1_BACSK
infA; translation initiation factor IF-1
RBGRP_36_27
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(22094..24961)
DNA (2868bp) protein (956aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_RIF_CHLX_69_14_curated
Protein translocase subunit SecY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZW8_THERP
preprotein translocase subunit SecY
RBGRP_36_28
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(25110..25781)
DNA (672bp) protein (224aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_RIF_CHLX_69_14_curated
50S ribosomal protein L15 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF80
rplO; 50S ribosomal protein L15
RBGRP_36_29
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(25778..25996)
DNA (219bp) protein (73aa)
LSU ribosomal protein L30P Tax=RBG_16_RIF_CHLX_69_14_curated
LSU ribosomal protein L30P
50S ribosomal protein L30 n=15 Tax=Clostridiales RepID=A7B527_RUMGN
RBGRP_36_30
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(25986..26525)
DNA (540bp) protein (180aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_RIF_CHLX_69_14_curated
30S ribosomal protein S5 n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=RS5_HELMI
rpsE; 30S ribosomal protein S5
Displaying items 1-30 of 49 in total

View Taxonomy