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RBGRP_55

Alias: scaffold_3059

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_55_1
RLO_PLX_64_10, Bacteria

Not on your lists

1..90
DNA (90bp) protein (30aa)
translation elongation factor Tu Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu
Elongation factor Tu n=1 Tax=Bdellovibrio bacteriovorus HD100 RepID=EFTU_BDEBA
RBGRP_55_2
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


103..411
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 n=11 Tax=Desulfuromonadales RepID=RS10_GEOBB
RBGRP_55_3
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


424..1095
DNA (672bp) protein (224aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L3
50S ribosomal protein L3 n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2K5_SPHTD
RBGRP_55_4
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1102..1725
DNA (624bp) protein (208aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Desulfarculus baarsii DSM 2075 RepID=E1QKT1_DESB2
RBGRP_55_5
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1722..2012
DNA (291bp) protein (97aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RL23_DESOH
RBGRP_55_6
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2031..2855
DNA (825bp) protein (275aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L2 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=RL2_PELPD
rplB; 50S ribosomal protein L2
RBGRP_55_7
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2895..3182
DNA (288bp) protein (96aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Deltaproteobacteria_54_18_curated
Ribosomal protein S19 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUM9_9DELT
30S ribosomal protein S19
RBGRP_55_8
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3213..3545
DNA (333bp) protein (111aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=Flexistipes sinusarabici DSM 4947 RepID=F8E9A4_FLESM
RBGRP_55_9
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3517..4221
DNA (705bp) protein (235aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=11 Tax=Geobacter RepID=RS3_GEOBB
RBGRP_55_10
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4234..4647
DNA (414bp) protein (138aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RL16_DESOH
RBGRP_55_11
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4647..4871
DNA (225bp) protein (75aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=2 Tax=Thermaerobacter RepID=E6SKZ2_THEM7
RBGRP_55_12
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4843..5106
DNA (264bp) protein (88aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Deltaproteobacteria_54_18_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=8 Tax=Caldicellulosiruptor RepID=RS17_CALBD
RBGRP_55_13
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5116..5484
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 n=2 Tax=Geobacter metallireducens RepID=RL14_GEOMG
RBGRP_55_14
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5481..5816
DNA (336bp) protein (112aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RL24_SYNFM
RBGRP_55_15
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5840..6376
DNA (537bp) protein (179aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 n=2 Tax=Geobacter RepID=RL5_GEOSF
RBGRP_55_16
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6389..6574
DNA (186bp) protein (62aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Deltaproteobacteria_54_18_curated
30S ribosomal protein S14 type Z n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RS14Z_PELCD
30S ribosomal protein S14 type Z
RBGRP_55_17
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6591..6824
DNA (234bp) protein (78aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=97 Tax=Pseudomonas RepID=RS8_PSE14
RBGRP_55_18
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6821..6982
DNA (162bp) protein (54aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=2 Tax=Geobacter sulfurreducens RepID=RS8_GEOSL
RBGRP_55_19
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7001..7537
DNA (537bp) protein (179aa)
50S ribosomal protein L6 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LN19_9FIRM
RBGRP_55_20
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7548..7910
DNA (363bp) protein (121aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RL18_CARHZ
RBGRP_55_21
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7922..8434
DNA (513bp) protein (171aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Deltaproteobacteria_54_18_curated
30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NJC2_DESAR
RBGRP_55_22
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8436..8618
DNA (183bp) protein (61aa)
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Desulfarculus baarsii DSM 2075 RepID=E1QKR4_DESB2
RBGRP_55_23
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8620..9057
DNA (438bp) protein (146aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Deltaproteobacteria_54_18_curated
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RL15_PELCD
RBGRP_55_24
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9060..9932
DNA (873bp) protein (291aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Deltaproteobacteria_54_18_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NJB9_DESAR
RBGRP_55_25
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9902..10372
DNA (471bp) protein (157aa)
Suspect SCG annotation. See neighboring gene [RBGRP_55_24].
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Deltaproteobacteria_54_18_curated
Protein translocase subunit SecY n=1 Tax=uncultured bacterium RepID=K1YMR1_9BACT
secY; preprotein translocase subunit SecY
RBGRP_55_26
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10395..11039
DNA (645bp) protein (215aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Deltaproteobacteria_54_18_curated
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Geobacter daltonii FRC-32 RepID=KAD_GEOSF
RBGRP_55_27
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11050..11307
DNA (258bp) protein (86aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Deltaproteobacteria_54_18_curated
translation initiation factor IF-1
Translation initiation factor IF-1 n=4 Tax=Leptospirillum RepID=A3EVP8_9BACT
RBGRP_55_28
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11304..11417
DNA (114bp) protein (38aa)
LSU ribosomal protein L36P Tax=RBG_16_Deltaproteobacteria_54_18_curated
50S ribosomal protein L36
50S ribosomal protein L36 n=9 Tax=Bacteria RepID=C3XDY4_9HELI
RBGRP_55_29
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11431..11799
DNA (369bp) protein (123aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Deltaproteobacteria_54_18_curated
Ribosomal protein S13 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXZ4_DESAC
rpsM; 30S ribosomal protein S13
RBGRP_55_30
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11818..12210
DNA (393bp) protein (131aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Deltaproteobacteria_54_18_curated
30S ribosomal protein S11 n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8AA61_THEID
30S ribosomal protein S11
Displaying items 1-30 of 47 in total

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