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RBGRP_63

Alias: scaffold_3754

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_63_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..427)
DNA (426bp) protein (142aa)
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RBG_16_Betaproteobacteria_58_11_curated
Single-stranded DNA-binding protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DU46_9BACT
single-strand binding protein
RBGRP_63_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..1805)
DNA (1395bp) protein (465aa)
major facilitator superfamily protein Tax=RBG_16_Betaproteobacteria_58_11_curated
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Methylovorus RepID=C6XAV3_METSD
RBGRP_63_3
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1935..4766
DNA (2832bp) protein (944aa)
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1632857 species="B
uvrA; excinuclease ABC subunit A
Excinuclease ABC subunit A n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6UGI5_9PROT
RBGRP_63_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4747..6615)
DNA (1869bp) protein (623aa)
periplasmic sensor hybrid histidine kinase Tax=RBG_16_Betaproteobacteria_58_11_curated
periplasmic sensor hybrid histidine kinase
Periplasmic sensor hybrid histidine kinase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WU0_RHOFD
RBGRP_63_5
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6612..7550)
DNA (939bp) protein (313aa)
ABC transporter substrate-binding protein Tax=RBG_16_Betaproteobacteria_58_11_curated
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Dechlorosoma suillum PS RepID=G8QGB3_AZOSU
ABC transporter substrate-binding protein
RBGRP_63_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7788..8072
DNA (285bp) protein (95aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_7
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8117..8389
DNA (273bp) protein (91aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8407..8658
DNA (252bp) protein (84aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8798..8998
DNA (201bp) protein (67aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9144..9362
DNA (219bp) protein (73aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9608..10057)
DNA (450bp) protein (150aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RBGRP_63_12
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10114..13509)
DNA (3396bp) protein (1132aa)
TonB-dependent receptor Tax=RBG_16_Betaproteobacteria_58_11_curated
TonB-dependent receptor
TonB-dependent receptor n=1 Tax=Nitrosococcus watsonii C-113 RepID=D8K7C6_NITWC
RBGRP_63_13
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13632..14291)
DNA (660bp) protein (220aa)
response regulator Tax=RBG_16_Betaproteobacteria_58_11_curated
Two component transcriptional regulator, LuxR family n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RCA1_9RHOO
agmR; Glycerol metabolism activator
RBGRP_63_14
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14650..16446
DNA (1797bp) protein (599aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB Tax=RBG_16_Betaproteobacteria_58_11_curated
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6VAQ7_9PROT
RBGRP_63_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16446..16691
DNA (246bp) protein (82aa)
hypothetical protein; K03636 molybdopterin synthase sulfur carrier subunit Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
Molybdopterin converting factor subunit 1 n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3SEQ2_9PROT
RBGRP_63_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16949..17326)
DNA (378bp) protein (126aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Betaproteobacteria_58_11_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Thauera sp. MZ1T RepID=C4KC25_THASP
RBGRP_63_17
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17354..17701)
DNA (348bp) protein (116aa)
rpoA; DNA-directed RNA polymerase subunit alpha Tax=RBG_16_Betaproteobacteria_58_11_curated
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6USI2_9PROT
RBGRP_63_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17677..18339)
DNA (663bp) protein (221aa)
rpoA; DNA-directed RNA polymerase subunit alpha Tax=RBG_16_Betaproteobacteria_58_11_curated
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6USI2_9PROT
RBGRP_63_19
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18368..18997)
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Betaproteobacteria_58_11_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6V592_9PROT
RBGRP_63_20
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19013..19408)
DNA (396bp) protein (132aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Betaproteobacteria_58_11_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RS11_THIDA
RBGRP_63_21
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19454..19810)
DNA (357bp) protein (119aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Betaproteobacteria_58_11_curated
30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Gallionella capsiferriformans ES-2 RepID=D9SCT5_GALCS
RBGRP_63_22
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19898..20011)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limno
50S ribosomal protein L36 n=1 Tax=Limnobacter sp. MED105 RepID=A6GPH8_9BURK
rpmJ; 50S ribosomal protein L36
RBGRP_63_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20070..20288)
DNA (219bp) protein (73aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Betaproteobacteria_58_11_curated
infA; translation initiation factor IF-1
Translation initiation factor IF-1 n=2 Tax=root RepID=K6VR22_9PROT
RBGRP_63_24
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20315..21634)
DNA (1320bp) protein (440aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Betaproteobacteria_58_11_curated
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SLM9_THIDA
RBGRP_63_25
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21648..22097)
DNA (450bp) protein (150aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Betaproteobacteria_58_11_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=D5CP84_SIDLE
RBGRP_63_26
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22098..22283)
DNA (186bp) protein (62aa)
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Betaproteobacteria_58_11_curated
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Thauera sp. MZ1T RepID=C4KC34_THASP
RBGRP_63_27
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22287..22796)
DNA (510bp) protein (170aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Betaproteobacteria_58_11_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RS5_THIDA
RBGRP_63_28
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22809..23162)
DNA (354bp) protein (118aa)
rplR; ribosomal protein L18 Tax=RBG_16_Betaproteobacteria_58_11_curated
50S ribosomal protein L18 n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6VR28_9PROT
rplR; ribosomal protein L18
RBGRP_63_29
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23188..23721)
DNA (534bp) protein (178aa)
rplF; 50S ribosomal protein L6 Tax=RBG_16_Betaproteobacteria_58_11_curated
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6USJ2_9PROT
RBGRP_63_30
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23734..24129)
DNA (396bp) protein (132aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Betaproteobacteria_58_11_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=RS8_LARHH
Displaying items 1-30 of 46 in total

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