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RBGRP_70

Alias: scaffold_4271

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_70_1
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3..668
DNA (666bp) protein (222aa)
Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_2
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

679..1737
DNA (1059bp) protein (353aa)
Caspase domain-containing protein Tax=RBG_16_Planctomycetes_64_12_curated
Caspase domain-containing protein
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MQT9_9PLAN
RBGRP_70_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1704..2987
DNA (1284bp) protein (428aa)
Caspase domain-containing protein Tax=RBG_16_Planctomycetes_64_12_curated
Caspase domain-containing protein
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MQT9_9PLAN
RBGRP_70_4
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3029..5005)
DNA (1977bp) protein (659aa)
PDZ/DHR/GLGF domain-containing protein Tax=RBG_16_Planctomycetes_64_12_curated
PDZ/DHR/GLGF domain-containing protein
peptidase-like protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4AFF
RBGRP_70_5
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5163..5828
DNA (666bp) protein (222aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_6
unknown

Not on your lists

5877..6242
DNA (366bp) protein (122aa)

This feature has no annotations

RBGRP_70_7
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6239..6538
DNA (300bp) protein (100aa)
Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6588..8636)
DNA (2049bp) protein (683aa)
WD40 repeat-containing protein Tax=RBG_16_Planctomycetes_64_12_curated
serine/threonine protein kinase with WD40 repeats n=1 Tax=Schlesneria paludicola DSM 18645 RepID=UPI00029A21A9
WD40 repeat-containing protein
RBGRP_70_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8692..9420
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SMJ3_PLABD
RBGRP_70_10
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9430..10182)
DNA (753bp) protein (251aa)
Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_11
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10214..11182)
DNA (969bp) protein (323aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Belliella baltica DSM 15883 RepID=I3Z1Y5_BELBD
RBGRP_70_12
unknown

Not on your lists

comp(11161..11646)
DNA (486bp) protein (162aa)

This feature has no annotations

RBGRP_70_13
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11659..13188)
DNA (1530bp) protein (510aa)
Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_14
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13196..14038)
DNA (843bp) protein (281aa)
Tax=RBG_16_Planctomycetes_64_12_curated
RBGRP_70_15
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14205..14765
DNA (561bp) protein (187aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
Putative manganese efflux pump MntP n=2 Tax=Geobacter RepID=MNTP_GEOBB
RBGRP_70_16
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14775..15779)
DNA (1005bp) protein (335aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
Protein containing DUF1559 n=3 Tax=Rhodopirellula baltica RepID=F2AZ71_RHOBT
hypothetical protein
RBGRP_70_17
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16098..16400)
DNA (303bp) protein (101aa)
Ferredoxin Tax=RBG_16_Planctomycetes_64_12_curated
ferredoxin
Ferredoxin n=2 Tax=Dehalobacter RepID=K4L452_9FIRM
RBGRP_70_18
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16361..17503)
DNA (1143bp) protein (381aa)
CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) Tax=RBG_16_Planctomycetes_64_12_curated
putative corrinoidprotein
CO dehydrogenase/acetyl-CoA synthase gamma subunit (Corrinoid Fe-S protein) n=1 Tax=Desulfomonile tiedjei DSM 6799 RepID=I4C2E8_DESTA
RBGRP_70_19
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17534..19927)
DNA (2394bp) protein (798aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Cyclobacterium marinum DSM 745 RepID=G0IYB9_CYCMS
RBGRP_70_20
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20093..20710)
DNA (618bp) protein (206aa)
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZKW2_9PLAN
hypothetical protein
RBGRP_70_21
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(21064..21756)
DNA (693bp) protein (231aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Planctomycetes_64_12_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=3 Tax=Rhodopirellula baltica RepID=RL17_RHOBA
RBGRP_70_22
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21838..22836)
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Planctomycetes_64_12_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6J4_PIRSD
RBGRP_70_23
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(22882..23508)
DNA (627bp) protein (209aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Planctomycetes_64_12_curated
30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Isosphaera pallida ATCC 43644 RepID=E8R482_ISOPI
RBGRP_70_24
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(23606..23986)
DNA (381bp) protein (127aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Planctomycetes_64_12_curated
Ribosomal protein S11 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6J3_PIRSD
30S ribosomal protein S11
RBGRP_70_25
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(24056..24439)
DNA (384bp) protein (128aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Planctomycetes_64_12_curated
30S ribosomal protein S13
Ribosomal protein S13 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6J2_PIRSD
RBGRP_70_26
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24561..24674)
DNA (114bp) protein (38aa)
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Planctomycetes_64_12_curated
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0HZI9_CALAS
RBGRP_70_27
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24883..25695)
DNA (813bp) protein (271aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Planctomycetes_64_12_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SJA5_PLABD
RBGRP_70_28
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25685..26266)
DNA (582bp) protein (194aa)
adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Planctomycetes_64_12_curated
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Desulfurobacterium thermolithotrophum DSM 11699 RepID=F0S1E1_DESTD
RBGRP_70_29
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(26335..27120)
DNA (786bp) protein (262aa)
protein translocase subunit secY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RBG_16_Planctomycetes_64_12_curated
Protein translocase subunit SecY n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SJA4_PLABD
protein translocase subunit secY/sec61 alpha
RBGRP_70_30
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(27123..27719)
DNA (597bp) protein (199aa)
Suspect SCG annotation. See neighboring gene [RBGRP_70_29].
protein translocase subunit secY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RBG_16_Planctomycetes_64_12_curated
Protein translocase subunit SecY n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLF1_9PLAN
protein translocase subunit secY/sec61 alpha
Displaying items 1-30 of 54 in total

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