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RBGRP_85

Alias: scaffold_6764

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_85_1
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
signal transduction histidine kinase Tax=RBG_16_Gamma2_65_34_curated
signal transduction histidine kinase
Signal transduction histidine kinase n=1 Tax=Dechlorosoma suillum PS RepID=G8QNZ6_AZOSU
RBGRP_85_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..1278)
DNA (723bp) protein (241aa)
hypothetical protein; K09134 hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
Putative uncharacterized protein n=2 Tax=Azospirillum RepID=D3NQI8_AZOS1
RBGRP_85_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1376..1879)
DNA (504bp) protein (168aa)
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L17P
50S ribosomal protein L17 n=3 Tax=Methylophilaceae RepID=RL17_METFK
RBGRP_85_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1882..2901)
DNA (1020bp) protein (340aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Gamma2_65_34_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=117 Tax=Pseudomonadaceae RepID=RPOA_PSE14
RBGRP_85_5
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2930..3556)
DNA (627bp) protein (209aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S4 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=RS4_NITMU
rpsD; 30S ribosomal protein S4
RBGRP_85_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3688..4101)
DNA (414bp) protein (138aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RYX0_9BURK
RBGRP_85_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4122..4502)
DNA (381bp) protein (127aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gamma2_65_34_curated
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Laribacter hongkongensis HLHK9 RepID=RS13_LARHH
RBGRP_85_8
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4612..4725)
DNA (114bp) protein (38aa)
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Gamma2_65_34_curated
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 n=24 Tax=Francisella RepID=RL36_FRAT1
RBGRP_85_9
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4836..6182)
DNA (1347bp) protein (449aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gamma2_65_34_curated
Protein translocase subunit SecY n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCN5_9GAMM
secY; preprotein translocase subunit SecY
RBGRP_85_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6215..6649)
DNA (435bp) protein (145aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L15 n=1 Tax=Thioalkalivibrio sulfidophilus HL-EbGr7 RepID=RL15_THISH
50S ribosomal protein L15
RBGRP_85_11
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6651..6851)
DNA (201bp) protein (67aa)
ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Gamma2_65_34_curated
ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=D5CP83_SIDLE
RBGRP_85_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6862..7419)
DNA (558bp) protein (186aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Gamma2_65_34_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VGM3_9GAMM
RBGRP_85_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7388..7744)
DNA (357bp) protein (119aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Gamma2_65_34_curated
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Cellvibrio sp. BR RepID=I3I692_9GAMM
RBGRP_85_14
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7760..8332)
DNA (573bp) protein (191aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Gamma2_65_34_curated
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 n=5 Tax=Pseudomonas RepID=RL6_PSEMY
RBGRP_85_15
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8307..8702)
DNA (396bp) protein (132aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S8
30S ribosomal protein S8 n=1 Tax=Azoarcus sp. BH72 RepID=RS8_AZOSB
RBGRP_85_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8806..9111)
DNA (306bp) protein (102aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S14 n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289DE32
30S ribosomal protein S14
RBGRP_85_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9098..9655)
DNA (558bp) protein (186aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Gamma2_65_34_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 n=2 Tax=Psychromonas RepID=RL5_PSYIN
RBGRP_85_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9630..9914)
DNA (285bp) protein (95aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gamma2_65_34_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=3 Tax=Nitrosococcus RepID=RL24_NITOC
RBGRP_85_19
unknown

Not on your lists

comp(9899..9991)
DNA (93bp) protein (31aa)

This feature has no annotations

RBGRP_85_20
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10134..10502)
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Idiomarina sp. A28L RepID=F7RVG5_9GAMM
RBGRP_85_21
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10580..10849)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Thiocystis violascens DSM 198 RepID=I3YGA5_THIV6
RBGRP_85_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10846..11049)
DNA (204bp) protein (68aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=1 Tax=Oceanimonas sp. GK1 RepID=H2G013_OCESG
RBGRP_85_23
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11063..11473)
DNA (411bp) protein (137aa)
LSU ribosomal protein L16P Tax=RBG_16_Gamma2_65_34_curated
LSU ribosomal protein L16P
50S ribosomal protein L16 n=1 Tax=uncultured beta proteobacterium RepID=H5SGZ3_9PROT
RBGRP_85_24
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11565..12242)
DNA (678bp) protein (226aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gamma2_65_34_curated
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Methylomicrobium alcaliphilum 20Z RepID=G4STL2_META2
RBGRP_85_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12242..12610)
DNA (369bp) protein (123aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Gamma2_65_34_curated
rplV; large subunit ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=RL22_ALHEH
RBGRP_85_26
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12614..12901)
DNA (288bp) protein (96aa)
rpsS; 30S ribosomal protein S19 Tax=RBG_16_Gamma2_65_34_curated
30S ribosomal protein S19 n=1 Tax=uncultured bacterium RepID=K2ETY6_9BACT
rpsS; 30S ribosomal protein S19
RBGRP_85_27
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12915..13739)
DNA (825bp) protein (275aa)
rplB; 50S ribosomal protein L2 Tax=RBG_16_Gamma2_65_34_curated
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=2 Tax=Sulfuricella denitrificans skB26 RepID=K6V8V7_9PROT
RBGRP_85_28
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13753..14049)
DNA (297bp) protein (99aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_16_Gamma2_65_34_curated
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Methylobacillus flagellatus KT RepID=RL23_METFK
RBGRP_85_29
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14046..14663)
DNA (618bp) protein (206aa)
rplD; 50S ribosomal protein L4 Tax=RBG_16_Gamma2_65_34_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Tolumonas auensis DSM 9187 RepID=RL4_TOLAT
RBGRP_85_30
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14750..15403)
DNA (654bp) protein (218aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Gamma2_65_34_curated
50S ribosomal protein L3 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCQ5_9GAMM
50S ribosomal protein L3
Displaying items 1-30 of 31 in total

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