ggKbase home page

RBGRP_89

Alias: scaffold_6860

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_89_1
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


3..227
DNA (225bp) protein (75aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Nitrospirae_43_8_curated
30S ribosomal protein S3
30S ribosomal protein S3 n=4 Tax=Desulfotomaculum RepID=RS3_DESRM
RBGRP_89_2
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


231..641
DNA (411bp) protein (137aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Nitrospirae_43_8_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL16_THEYD
RBGRP_89_3
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists


638..835
DNA (198bp) protein (66aa)
rpmC; ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=GWF2_Nitrospirae_44_13_curated
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL29_THEYD
RBGRP_89_4
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists


849..1091
DNA (243bp) protein (81aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=GWF2_Nitrospirae_44_13_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=8 Tax=Caldicellulosiruptor RepID=RS17_CALBD
RBGRP_89_5
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


1105..1473
DNA (369bp) protein (123aa)
rplN; ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Nitrospirae_43_8_curated
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL14_THEYD
RBGRP_89_6
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


1477..1797
DNA (321bp) protein (107aa)
rplX; ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Nitrospirae_43_8_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG36_THEYD
RBGRP_89_7
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


1773..2372
DNA (600bp) protein (200aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Nitrospirae_43_8_curated
50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG35_THEYD
RBGRP_89_8
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


2376..2561
DNA (186bp) protein (62aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Nitrospirae_43_8_curated
30S ribosomal protein S14 type Z n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HW91_9BACT
rpsN; 30S ribosomal protein S14
RBGRP_89_9
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


2573..2965
DNA (393bp) protein (131aa)
rpsH; ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Nitrospirae_43_8_curated
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RS8_THEYD
RBGRP_89_10
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


2981..3523
DNA (543bp) protein (181aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Nitrospirae_43_8_curated
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL6_THEYD
RBGRP_89_11
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


3728..3985
DNA (258bp) protein (86aa)
rplR; 50S ribosomal protein L18 Tax=RBG_16_Nitrospirae_43_8_curated
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LIL7_9THEO
RBGRP_89_12
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


4067..4588
DNA (522bp) protein (174aa)
rpsE; ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Nitrospirae_43_8_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG30_THEYD
RBGRP_89_13
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


4585..5025
DNA (441bp) protein (147aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Nitrospirae_43_8_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9RZN0_THEOJ
RBGRP_89_14
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


5087..6397
DNA (1311bp) protein (437aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Nitrospirae_43_8_curated
preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG28_THEYD
RBGRP_89_15
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

6406..7179
DNA (774bp) protein (258aa)
map; methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Nitrospirae_43_8_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG27_THEYD
RBGRP_89_16
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

7204..7422
DNA (219bp) protein (73aa)
translation initiation factor 1; K02518 translation initiation factor IF-1 Tax=RBG_16_Nitrospirae_43_8_curated
translation initiation factor 1
Translation initiation factor IF-1 n=4 Tax=Leptospirillum RepID=A3EVP8_9BACT
RBGRP_89_17
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

7453..7566
DNA (114bp) protein (38aa)
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Nitrospirae_43_8_curated
50S ribosomal protein L36
50S ribosomal protein L36 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=D4H3B1_DENA2
RBGRP_89_18
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists


7622..7975
DNA (354bp) protein (118aa)
rpsM; ribosomal protein S13p/S18e; K02952 small subunit ribosomal protein S13 Tax=GWF2_Nitrospirae_44_13_curated
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RS13_THEYD
RBGRP_89_19
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists


7979..8365
DNA (387bp) protein (129aa)
rpsK; ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=GWF2_Nitrospirae_44_13_curated
rpsK; 30S ribosomal protein S11
Ribosomal protein S11 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG24_THEYD
RBGRP_89_20
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


8368..8994
DNA (627bp) protein (209aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Nitrospirae_43_8_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WS74_BACT2
RBGRP_89_21
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

9030..10067
DNA (1038bp) protein (346aa)
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Nitrospirae_43_8_curated
rpoA; DNA-directed RNA polymerase subuit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YG22_THEYD
RBGRP_89_22
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


10057..10482
DNA (426bp) protein (142aa)
rplQ; ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Nitrospirae_43_8_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL17_THEYD
RBGRP_89_23
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

10859..11293
DNA (435bp) protein (145aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXL8_9BACT
hypothetical protein
RBGRP_89_24
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11422..11850
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10] Tax=RBG_16_Nitrospirae_43_8_curated
3-dehydroquinate dehydratase n=1 Tax=Geobacter uraniireducens Rf4 RepID=AROQ_GEOUR
3-dehydroquinate dehydratase (EC:4.2.1.10)
RBGRP_89_25
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

11856..12911
DNA (1056bp) protein (352aa)
Xaa-Pro aminopeptidase Tax=RBG_16_Nitrospirae_43_8_curated
Xaa-Pro aminopeptidase
Aminopeptidase P n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ33_THEYD
RBGRP_89_26
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

12930..13493
DNA (564bp) protein (188aa)
efp; translation elongation factor P; K02356 elongation factor P Tax=RBG_16_Nitrospirae_43_8_curated
Elongation factor P n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0J9_9BACT
efp; translation elongation factor P
RBGRP_89_27
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

13534..13959
DNA (426bp) protein (142aa)
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=RBG_16_Nitrospirae_43_8_curated
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ31_THEYD
RBGRP_89_28
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

13992..15353
DNA (1362bp) protein (454aa)
accC1; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=RBG_16_Nitrospirae_43_8_curated
accC1; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ30_THEYD
RBGRP_89_29
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

15350..15643
DNA (294bp) protein (98aa)
id=3930577 Tax=RBG_16_Nitrospirae_43_8_curated
RBGRP_89_30
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists


15723..15932
DNA (210bp) protein (70aa)
rpmE; ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RBG_16_Nitrospirae_43_8_curated
50S ribosomal protein L31 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL31_THEYD
rpmE; 50S ribosomal protein L31
Displaying items 1-30 of 32 in total

View Taxonomy