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RBGRP_90

Alias: scaffold_7398

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_90_1
unknown

Not on your lists

comp(1..69)
DNA (69bp) protein (23aa)

This feature has no annotations

RBGRP_90_2
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(69..506)
DNA (438bp) protein (146aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Thioalkalivibrio sulfidophilus HL-EbGr7 RepID=RL15_THISH
RBGRP_90_3
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(690..881)
DNA (192bp) protein (64aa)
rpmD; 50S ribosomal protein L30 Tax=RBG_16_Gamma2_60_9_curated
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Thauera sp. MZ1T RepID=C4KC34_THASP
RBGRP_90_4
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1063..1575)
DNA (513bp) protein (171aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Gamma2_60_9_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=4 Tax=Nitrosococcus RepID=RS5_NITOC
RBGRP_90_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1585..1941)
DNA (357bp) protein (119aa)
rplR; 50S ribosomal protein L18 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L18 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G723_9GAMM
50S ribosomal protein L18
RBGRP_90_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1951..2484)
DNA (534bp) protein (178aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Gamma2_60_9_curated
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=RL6_ALHEH
RBGRP_90_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2660..3052)
DNA (393bp) protein (131aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Gamma2_60_9_curated
30S ribosomal protein S8 n=1 Tax=Limnobacter sp. MED105 RepID=A6GPH0_9BURK
rpsH; 30S ribosomal protein S8
RBGRP_90_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3157..3462)
DNA (306bp) protein (102aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gamma2_60_9_curated
30S ribosomal protein S14 n=1 Tax=Methylomicrobium album BG8 RepID=H8GQ28_METAL
rpsN; 30S ribosomal protein S14
RBGRP_90_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3467..4006)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=RBG_16_Gamma2_60_9_curated
rplE; large subunit ribosomal protein L5
50S ribosomal protein L5 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP3_9GAMM
RBGRP_90_10
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4013..4333)
DNA (321bp) protein (107aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G718_9GAMM
RBGRP_90_11
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4483..4851)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L14
50S ribosomal protein L14 n=2 Tax=Thioalkalimicrobium RepID=G4D8X4_9GAMM
RBGRP_90_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4936..5217)
DNA (282bp) protein (94aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Gamma2_60_9_curated
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G716_9GAMM
RBGRP_90_13
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5214..5408)
DNA (195bp) protein (65aa)
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Gamma2_60_9_curated
LSU ribosomal protein L29p
50S ribosomal protein L29 n=19 Tax=Alcaligenaceae RepID=RL29_BORA1
RBGRP_90_14
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5413..5820)
DNA (408bp) protein (136aa)
rplP; 50S ribosomal protein L16 Tax=RBG_16_Gamma2_60_9_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=1 Tax=Simiduia agarivorans SA1 = DSM 21679 RepID=K4KYJ4_9GAMM
RBGRP_90_15
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5925..6602)
DNA (678bp) protein (226aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gamma2_60_9_curated
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7Q7Y4_9GAMM
RBGRP_90_16
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6603..6956)
DNA (354bp) protein (118aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=RL22_NITMU
RBGRP_90_17
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6961..7257)
DNA (297bp) protein (99aa)
SSU ribosomal protein S19P; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Gamma2_60_9_curated
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 n=2 Tax=Betaproteobacteria RepID=A0P876_9PROT
RBGRP_90_18
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7270..8100)
DNA (831bp) protein (277aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_16_Gamma2_60_9_curated
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=2 Tax=Rhodocyclaceae RepID=RL2_AZOSB
RBGRP_90_19
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8115..8414)
DNA (300bp) protein (100aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RBG_16_Gamma2_60_9_curated
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Methylobacillus flagellatus KT RepID=RL23_METFK
RBGRP_90_20
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8411..9028)
DNA (618bp) protein (206aa)
rplD; 50S ribosomal protein L4 Tax=RBG_16_Gamma2_60_9_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 n=1 Tax=Marinobacter sp. ELB17 RepID=A3JEQ2_9ALTE
RBGRP_90_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9073..9738)
DNA (666bp) protein (222aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_16_Gamma2_60_9_curated
50S ribosomal protein L3
50S ribosomal protein L3 n=1 Tax=Thioalkalivibrio sulfidophilus HL-EbGr7 RepID=RL3_THISH
RBGRP_90_22
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9868..10182)
DNA (315bp) protein (105aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_16_Gamma2_60_9_curated
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 n=1 Tax=beta proteobacterium KB13 RepID=B6BV79_9PROT
RBGRP_90_23
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10195..11457)
DNA (1263bp) protein (421aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=RBG_16_Gamma2_60_9_curated
tufA; elongation factor Tu
Elongation factor Tu n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=EFTU_THIDA
RBGRP_90_24
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..12055)
DNA (507bp) protein (169aa)
translation elongation factor G; K02355 elongation factor G Tax=RBG_16_Gamma2_60_9_curated
Elongation factor G n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0E2_9BURK
translation elongation factor G
RBGRP_90_25
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12031..13290)
DNA (1260bp) protein (420aa)
translation elongation factor G; K02355 elongation factor G Tax=RBG_16_Gamma2_60_9_curated
translation elongation factor G
Elongation factor G n=13 Tax=Chromatiaceae RepID=D3RMZ5_ALLVD
RBGRP_90_26
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13780..14250)
DNA (471bp) protein (157aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RBG_16_Gamma2_60_9_curated
30S ribosomal protein S7 n=1 Tax=Beggiatoa alba B18LD RepID=I3CIM7_9GAMM
30S ribosomal protein S7
RBGRP_90_27
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14356..14730)
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12 Tax=RBG_16_Gamma2_60_9_curated
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 n=1 Tax=uncultured beta proteobacterium RepID=H5SH05_9PROT
RBGRP_90_28
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14982..16784)
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_16_Gamma2_60_9_curated
DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta' n=6 Tax=Rhodanobacter RepID=G4FZ44_9GAMM
RBGRP_90_29
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16794..19199)
DNA (2406bp) protein (802aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_16_Gamma2_60_9_curated
DNA-directed RNA polymerase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G739_9GAMM
DNA-directed RNA polymerase subunit beta'
RBGRP_90_30
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19271..22069)
DNA (2799bp) protein (933aa)
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RBG_16_Gamma2_60_9_curated
DNA-directed RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta n=1 Tax=Thioalkalivibrio sulfidophilus HL-EbGr7 RepID=RPOB_THISH
Displaying items 1-30 of 39 in total

View Taxonomy