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RBGRP_101

Alias: scaffold_9181

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_101_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2..1324)
DNA (1323bp) protein (441aa)
radical SAM domain-containing protein; K06937 Tax=RBG_13_Bathyarchaeota_46_16b_curated
radical SAM domain-containing protein
Molybdenum cofactor biosynthesis protein (MoaA) n=5 Tax=Pyrobaculum RepID=Q8ZVH2_PYRAE
RBGRP_101_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1660..3933
DNA (2274bp) protein (758aa)
hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=RBG_13_Bathyarchaeota_46_16b_curated
(NiFe) hydrogenase maturation protein HypF
Probable carbamoyltransferase HypF n=1 Tax=Methanocaldococcus jannaschii DSM 2661 RepID=HYPF_METJA
RBGRP_101_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3986..4207
DNA (222bp) protein (74aa)
hydrogenase assembly chaperone HypC/HupF Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase assembly chaperone HypC/HupF
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1D2_9CREN
RBGRP_101_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4233..4895
DNA (663bp) protein (221aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypD; hydrogenase expression/formation protein HypD
Predicted hydrogenase expression/formation protein HypD n=2 Tax=Methanothermobacter RepID=D9PXU1_METTM
RBGRP_101_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4837..5337
DNA (501bp) protein (167aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase formation HypD protein
Hydrogenase formation HypD protein n=2 Tax=Pyrobaculum RepID=B1YBW3_PYRNV
RBGRP_101_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5498..6511)
DNA (1014bp) protein (338aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=RBG_13_Bathyarchaeota_46_16b_curated
hydrogenase expression/formation protein HypE
Hydrogenase expression/formation protein HypE n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YFA3_METS5
RBGRP_101_7

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6791..7276
DNA (486bp) protein (162aa)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22
50S ribosomal protein L22P n=3 Tax=Methanocaldococcus RepID=RL22_METJA
RBGRP_101_8

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7276..8022
DNA (747bp) protein (249aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; ribosomal protein S3P Rps3p
30S ribosomal protein S3 n=1 Tax=Methanobacterium sp. AL-21 RepID=F0TB80_METSL
RBGRP_101_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8022..8258
DNA (237bp) protein (79aa)
50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=RBG_13_Bathyarchaeota_46_16b_curated
50S ribosomal protein L29P
50S ribosomal protein L29P n=2 Tax=Methanohalophilus RepID=D5E6S0_METMS
RBGRP_101_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8255..8536
DNA (282bp) protein (94aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ribonuclease P protein component 1
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. SWAN-1 RepID=F6D7K9_METSW
RBGRP_101_11

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8515..8853
DNA (339bp) protein (113aa)
30S ribosomal protein S17, small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13228.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
30S ribosomal protein S17P n=2 Tax=Methanopyrus kandleri AV19 RepID=RS17_METKA
RBGRP_101_12

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8855..9295
DNA (441bp) protein (147aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
50S ribosomal protein L14P n=1 Tax=Aciduliprofundum boonei T469 RepID=D3TB38_ACIB4
RBGRP_101_13

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9308..10051
DNA (744bp) protein (248aa)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24
50S ribosomal protein L24P n=2 Tax=Staphylothermus RepID=RL24_STAMF
RBGRP_101_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


10054..10818
DNA (765bp) protein (255aa)
30S ribosomal protein S4E, central domain-containing protein; K02987 small subunit ribosomal protein S4e Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S4
30S ribosomal protein S4e n=2 Tax=Staphylothermus RepID=RS4E_STAMF
RBGRP_101_15

Not on your lists


10811..11350
DNA (540bp) protein (180aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl5p; 50S ribosomal protein L5
50S ribosomal protein L5P n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8ACD5_IGNH4
RBGRP_101_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


11364..11528
DNA (165bp) protein (55aa)
30S ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RBG_13_Bathyarchaeota_46_16b_curated
30S ribosomal protein S14P
30S ribosomal protein S14 type Z n=8 Tax=Thermococcus RepID=RS14Z_PYRKO
RBGRP_101_17

Not on your lists


11544..11927
DNA (384bp) protein (128aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8 n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8P
RBGRP_101_18

Not on your lists


11940..12488
DNA (549bp) protein (183aa)
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
50S ribosomal protein L6P n=1 Tax=Pyrolobus fumarii 1A RepID=G0ECG1_PYRF1
RBGRP_101_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

12485..13042
DNA (558bp) protein (186aa)
rpl32e; 50S ribosomal protein L32e Tax=RBG_13_Bathyarchaeota_46_16b_curated
50S ribosomal protein L32e
50S ribosomal protein L32e n=1 Tax=Thermoproteus uzoniensis 768-20 RepID=F2L315_THEU7
RBGRP_101_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13039..13176
DNA (138bp) protein (46aa)
rpl19e; 50S ribosomal protein L19; K02885 large subunit ribosomal protein L19e Tax=RBG_13_Bathyarchaeota_46_16b_curated
rpl19e; 50S ribosomal protein L19e
Ribosomal protein L19e n=6 Tax=Thermococcus RepID=C5A267_THEGJ
Displaying 20 items

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