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RBGRP_104

Alias: scaffold_10561

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_104_1
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
RBGRP_104_2
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(335..658)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
RBGRP_104_3
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(655..1020)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
RBGRP_104_4
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1217..1429)
DNA (213bp) protein (71aa)
hypothetical protein Tax=RBG_16_Gamma2_64_10_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RPL5_ALLVD
RBGRP_104_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1516..1827)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
Protein containing DUF62 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U1P5_9PROT
RBGRP_104_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1800..2288)
DNA (489bp) protein (163aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein
Putative uncharacterized protein n=2 Tax=Azospirillum RepID=D3NQI8_AZOS1
RBGRP_104_7
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2422..2916)
DNA (495bp) protein (165aa)
50S ribosomal protein L17P; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gamma2_65_34_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2IBN9_9GAMM
RBGRP_104_8
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2935..3945)
DNA (1011bp) protein (337aa)
rpoA; DNA-directed RNA polymerase subunit alpha Tax=RBG_16_Gamma2_64_10_curated
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=117 Tax=Pseudomonadaceae RepID=RPOA_PSE14
RBGRP_104_9
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3976..4602)
DNA (627bp) protein (209aa)
Ribosomal protein S4 Tax=RBG_16_Gamma2_64_10_curated
Ribosomal protein S4 n=1 Tax=Cycloclasticus sp. P1 RepID=K0C842_9GAMM
Ribosomal protein S4
RBGRP_104_10
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4744..5163)
DNA (420bp) protein (140aa)
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LN92_9GAMM
RBGRP_104_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5188..5334)
DNA (147bp) protein (49aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gammaproteobacteria_62_13__curated
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=RS13_NITMU
RBGRP_104_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5334..5561)
DNA (228bp) protein (76aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SCR4_THISK
RBGRP_104_13
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5675..5788)
DNA (114bp) protein (38aa)
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Gamma2_65_34_curated
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 n=24 Tax=Francisella RepID=RL36_FRAT1
RBGRP_104_14
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5871..7190)
DNA (1320bp) protein (440aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Gamma2_64_10_curated
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY n=2 Tax=Ectothiorhodospiraceae RepID=B8GV38_THISH
RBGRP_104_15
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7191..7646)
DNA (456bp) protein (152aa)
50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L15P
50S ribosomal protein L15 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E5U0_9GAMM
RBGRP_104_16
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7758..7964)
DNA (207bp) protein (69aa)
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Gamma2_64_10_curated
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 n=1 Tax=Thauera sp. MZ1T RepID=C4KC34_THASP
RBGRP_104_17
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7976..8533)
DNA (558bp) protein (186aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RBG_16_Gamma2_64_10_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=4 Tax=Nitrosococcus RepID=RS5_NITOC
RBGRP_104_18
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8502..8858)
DNA (357bp) protein (119aa)
Ribosomal protein L18 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262CFF5
RBGRP_104_19
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8871..9404)
DNA (534bp) protein (178aa)
rplF; 50S ribosomal protein L6 Tax=RBG_16_Gamma2_64_10_curated
rplF; protein RplF
50S ribosomal protein L6 n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SWW7_9GAMM
RBGRP_104_20
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9423..9815)
DNA (393bp) protein (131aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S8
30S ribosomal protein S8 n=1 Tax=Leptothrix cholodnii SP-6 RepID=RS8_LEPCP
RBGRP_104_21
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9839..10144)
DNA (306bp) protein (102aa)
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Gamma2_64_10_curated
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 n=1 Tax=Methylococcus capsulatus str. Bath RepID=RS14_METCA
RBGRP_104_22
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10150..10689)
DNA (540bp) protein (180aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Gamma2_64_10_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=RL5_NITMU
RBGRP_104_23
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10699..11019)
DNA (321bp) protein (107aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L24 n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCP4_9GAMM
rplX; 50S ribosomal protein L24
RBGRP_104_24
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11140..11508)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Gamma2_64_10_curated
50S ribosomal protein L14 n=2 Tax=Gammaproteobacteria RepID=E8LN79_9GAMM
50S ribosomal protein L14
RBGRP_104_25
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11589..11867)
DNA (279bp) protein (93aa)
30S ribosomal protein S17 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S17 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z329_9GAMM
30S ribosomal protein S17
RBGRP_104_26
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11871..12059)
DNA (189bp) protein (63aa)
rpmC; 50S ribosomal protein L29 Tax=RBG_16_Gamma2_64_10_curated
rpmC; 50S ribosomal protein L29
50S ribosomal protein L29 n=2 Tax=Methylophaga RepID=C0N8Y5_9GAMM
RBGRP_104_27
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12092..12502)
DNA (411bp) protein (137aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Gamma2_64_10_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=5 Tax=Chromatiaceae RepID=D3RMY5_ALLVD
RBGRP_104_28
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12514..13194)
DNA (681bp) protein (227aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RBG_16_Gamma2_64_10_curated
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Methylomicrobium alcaliphilum 20Z RepID=G4STL2_META2
RBGRP_104_29
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13194..13559)
DNA (366bp) protein (122aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Gamma2_64_10_curated
rplV; large subunit ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYD7_9GAMM
RBGRP_104_30
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13565..13852)
DNA (288bp) protein (96aa)
rpsS; 30S ribosomal protein S19 Tax=RBG_16_Gamma2_64_10_curated
30S ribosomal protein S19 n=5 Tax=Betaproteobacteria RepID=RS19_AROAE
rpsS; 30S ribosomal protein S19
Displaying items 1-30 of 36 in total

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