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RBGRP_113

Alias: scaffold_13782

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_113_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(6..620)
DNA (615bp) protein (205aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Acidobacteria_68_9_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=3 Tax=Anaeromyxobacter RepID=RL17_ANAD2
RBGRP_113_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(628..1683)
DNA (1056bp) protein (352aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Acidobacteria_68_9_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RPOA_KORVE
RBGRP_113_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(1824..2453)
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Acidobacteria_68_9_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=RS4_PELPD
RBGRP_113_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(2645..2941)
DNA (297bp) protein (99aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RS11_SOLUE
RBGRP_113_5
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(3167..3541)
DNA (375bp) protein (125aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Acidobacteria_68_9_curated
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 n=14 Tax=Thermoanaerobacterales RepID=RS13_THEP3
RBGRP_113_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(3653..3766)
DNA (114bp) protein (38aa)
hypothetical protein; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Acidobacteria_68_9_curated
hypothetical protein
50S ribosomal protein L36 n=1 Tax=Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 RepID=D7GJ61_PROFC
RBGRP_113_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(3779..4018)
DNA (240bp) protein (80aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Acidobacteria_68_9_curated
translation initiation factor IF-1
Translation initiation factor IF-1 n=3 Tax=Peptococcaceae RepID=IF1_PELTS
RBGRP_113_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(4038..4652)
DNA (615bp) protein (205aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Acidobacteria_68_9_curated
methionine aminopeptidase
Methionine aminopeptidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FER4_DESAA
RBGRP_113_9
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(4598..4819)
DNA (222bp) protein (74aa)
Tax=RBG_16_Acidobacteria_68_9_curated
methionine aminopeptidase, type I n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=UPI0002982968
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
RBGRP_113_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4816..5559)
DNA (744bp) protein (248aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
adenylate kinase
Adenylate kinase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RXQ0_FERPA
RBGRP_113_11
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(5578..6963)
DNA (1386bp) protein (462aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Acidobacteria_68_9_curated
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Acidobacterium sp. MP5ACTX9 RepID=E8WZ43_ACISM
RBGRP_113_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(7015..7464)
DNA (450bp) protein (150aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_16_Acidobacteria_68_9_curated
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Thermoanaerobacter tengcongensis MB4 RepID=RL15_THETN
RBGRP_113_13
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(7464..7685)
DNA (222bp) protein (74aa)
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RBG_16_Acidobacteria_68_9_curated
50S ribosomal protein L30
50S ribosomal protein L30 n=2 Tax=Halomonadaceae RepID=RL30_CHRSD
RBGRP_113_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(7690..8205)
DNA (516bp) protein (172aa)
30S ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F625_ACIC5
RBGRP_113_15
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(8215..8601)
DNA (387bp) protein (129aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Acidobacteria_68_9_curated
50S ribosomal protein L18
Ribosomal protein L18, bacterial type n=2 Tax=Thermaerobacter RepID=K6Q1L1_9FIRM
RBGRP_113_16
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(8684..9220)
DNA (537bp) protein (179aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Acidobacteria_68_9_curated
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Acidobacterium sp. MP5ACTX9 RepID=E8WZ48_ACISM
RBGRP_113_17
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(9308..9712)
DNA (405bp) protein (135aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Acidobacteria_68_9_curated
30S ribosomal protein S8
30S ribosomal protein S8 n=3 Tax=Alicyclobacillus acidocaldarius RepID=B7DRY0_9BACL
RBGRP_113_18
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(9822..10007)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Acidobacteria_68_9_curated
30S ribosomal protein S14
30S ribosomal protein S14 type Z n=2 Tax=Acidobacteriaceae RepID=E8WZJ1_ACISM
RBGRP_113_19
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(10093..10635)
DNA (543bp) protein (181aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RBG_16_Acidobacteria_68_9_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISB0_KORVE
RBGRP_113_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(10632..10964)
DNA (333bp) protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Acidobacteria_68_9_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RL24_CARHZ
RBGRP_113_21
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(10967..11335)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Acidobacteria_68_9_curated
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F632_ACIC5
RBGRP_113_22
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(11442..11696)
DNA (255bp) protein (85aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Acidobacteria_68_9_curated
30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Thermovirga lienii DSM 17291 RepID=G7V8U9_THELD
RBGRP_113_23
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(11737..11943)
DNA (207bp) protein (69aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Acidobacteria_68_9_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RL29_SOLUE
RBGRP_113_24
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(11940..12365)
DNA (426bp) protein (142aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Acidobacteria_68_9_curated
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RL16_KORVE
RBGRP_113_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(12587..13165)
DNA (579bp) protein (193aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=RS3_SOLUE
RBGRP_113_26
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(13349..13795)
DNA (447bp) protein (149aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RBG_16_Acidobacteria_68_9_curated
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F637_ACIC5
RBGRP_113_27
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists


comp(13799..14158)
DNA (360bp) protein (120aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_16_Acidobacteria_68_9_curated
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RS19_KORVE
RBGRP_113_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(14268..14387)
DNA (120bp) protein (40aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=4 Tax=Leptospira RepID=RL2_LEPBA
Displaying 28 items

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