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RBGRP_117

Alias: scaffold_15006

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_117_1
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

286..699
DNA (414bp) protein (138aa)
Tax=RBG_16_Chloroflexi_50_11_curated
RBGRP_117_2
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

comp(895..1971)
DNA (1077bp) protein (359aa)
aspartate aminotransferase (EC:2.6.1.1); K11358 aspartate aminotransferase [EC:2.6.1.1] Tax=RBG_13_Chloroflexi_51_52_curated
Aspartate transaminase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CKR2_DESK7
aspartate transaminase (EC:2.6.1.1)
RBGRP_117_3
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1949..2632)
DNA (684bp) protein (228aa)
iorB; indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8); K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] Tax=RBG_16_Chloroflexi_50_11_curated
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase n=3 Tax=Dehalococcoides mccartyi RepID=A5FQV4_DEHSB
RBGRP_117_4
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2658..3167)
DNA (510bp) protein (170aa)
metallophosphoesterase Tax=RBG_16_Chloroflexi_50_11_curated
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Methanocaldococcus vulcanius M7 RepID=C9RG04_METVM
RBGRP_117_5
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3171..3749)
DNA (579bp) protein (193aa)
iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RBG_16_Chloroflexi_50_11_curated
iorA; indolepyruvate ferredoxin oxidoreductase subunit alpha
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Dehalococcoides sp. VS RepID=D2BHZ8_DEHSV
RBGRP_117_6
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(3772..4953)
DNA (1182bp) protein (394aa)
iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RBG_16_Chloroflexi_50_11_curated
indolepyruvate ferredoxin oxidoreductase subunit alpha
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Acetohalobium arabaticum DSM 5501 RepID=D9QSD4_ACEAZ
RBGRP_117_7
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

5170..5403
DNA (234bp) protein (78aa)
Fur family transcriptional regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RBG_13_Chloroflexi_51_18_curated
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K380_DEHLB
RBGRP_117_8
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5369..5572)
DNA (204bp) protein (68aa)
Tax=RBG_16_Chloroflexi_50_11_curated
RBGRP_117_9
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

5634..6284
DNA (651bp) protein (217aa)
hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PKM2_9ZZZZ
hypothetical protein
RBGRP_117_10
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

6281..7117
DNA (837bp) protein (279aa)
Marine sediment metagenome DNA, contig: S06H3_C02025 Tax=RBG_16_Chloroflexi_50_11_curated
RBGRP_117_11
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

7122..9842
DNA (2721bp) protein (907aa)
HAD superfamily ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=RBG_16_Chloroflexi_50_11_curated
HAD superfamily ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K0V5_DEHLB
RBGRP_117_12
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

10169..10582
DNA (414bp) protein (138aa)
hypothetical protein Tax=RBG_16_Chloroflexi_50_11_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K261_DEHLB
RBGRP_117_13
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

10790..11677
DNA (888bp) protein (296aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_16_Chloroflexi_50_11_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K184_DEHLB
RBGRP_117_14
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

11652..12065
DNA (414bp) protein (138aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_16_Chloroflexi_50_11_curated
S-adenosyl-L-homocysteine hydrolase
Adenosylhomocysteinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKD7_KORVE
RBGRP_117_15
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

12098..12268
DNA (171bp) protein (57aa)
metK-2; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_13_Chloroflexi_52_12_curated
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=5 Tax=Dehalococcoides mccartyi RepID=METK_DEHSC
RBGRP_117_16
RBG_13_Chloroflexi_52_12_curated, Chloroflexi, Bacteria

Not on your lists

12357..13211
DNA (855bp) protein (285aa)
metK-2; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RBG_13_Chloroflexi_52_12_curated
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=5 Tax=Dehalococcoides mccartyi RepID=METK_DEHSC
RBGRP_117_17
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

13736..14032
DNA (297bp) protein (99aa)
accC; acetyl-CoA carboxylase, biotin carboxylase Tax=RBG_16_Chloroflexi_50_11_curated
accC; acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase n=5 Tax=Dehalococcoides mccartyi RepID=D2BG53_DEHSV
RBGRP_117_18
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14089..14436)
DNA (348bp) protein (116aa)
Tax=RBG_16_Chloroflexi_50_11_curated
RBGRP_117_19
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

14593..15546
DNA (954bp) protein (318aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Tax=RBG_16_Chloroflexi_50_11_curated
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=4 Tax=Dehalococcoides mccartyi RepID=D3SI09_DEHSG
RBGRP_117_20
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

15877..16944
DNA (1068bp) protein (356aa)
bifunctional phosphoglucose/phosphomannose isomerase; K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RBG_16_Chloroflexi_50_11_curated
bifunctional phosphoglucose/phosphomannose isomerase
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K187_DEHLB
RBGRP_117_21
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(16951..17520)
DNA (570bp) protein (190aa)
metal-dependent hydrolase Tax=RBG_16_Chloroflexi_50_11_curated
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10F17 RepID=B3TC03_9ZZZZ
metal-dependent hydrolase
RBGRP_117_22
unknown

Not on your lists

17742..17990
DNA (249bp) protein (83aa)

This feature has no annotations

RBGRP_117_23
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(18026..18463)
DNA (438bp) protein (146aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_16_Chloroflexi_50_11_curated
50S ribosomal protein L13
50S ribosomal protein L13 n=1 Tax=Desmospora sp. 8437 RepID=F5SIE9_9BACL
RBGRP_117_24
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(18460..19248)
DNA (789bp) protein (263aa)
tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Chloroflexi_50_11_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K190_DEHLB
RBGRP_117_25
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(19281..19634)
DNA (354bp) protein (118aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Chloroflexi_50_11_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Geobacter uraniireducens Rf4 RepID=RL17_GEOUR
RBGRP_117_26
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19658..20689)
DNA (1032bp) protein (344aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Chloroflexi_50_11_curated
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=5 Tax=Dehalococcoides mccartyi RepID=RPOA_DEHSC
RBGRP_117_27
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(20711..21346)
DNA (636bp) protein (212aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Chloroflexi_50_11_curated
30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K193_DEHLB
RBGRP_117_28
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(21357..21749)
DNA (393bp) protein (131aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Chloroflexi_50_11_curated
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 n=5 Tax=Dehalococcoides mccartyi RepID=RS11_DEHE1
RBGRP_117_29
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(21780..22169)
DNA (390bp) protein (130aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Chloroflexi_50_11_curated
30S ribosomal protein S13
30S ribosomal protein S13 n=5 Tax=Dehalococcoides mccartyi RepID=RS13_DEHE1
RBGRP_117_30
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(22184..22297)
DNA (114bp) protein (38aa)
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_16_Chloroflexi_50_11_curated
50S ribosomal protein L36
50S ribosomal protein L36 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFF0_THET1
Displaying items 1-30 of 56 in total

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