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RBGRP_128

Alias: scaffold_21289

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBGRP_128_1
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3..278
DNA (276bp) protein (92aa)
Tax=RBG_16_Planctomycetes_55_9_curated
RBGRP_128_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

314..592
DNA (279bp) protein (93aa)
molecular chaperone DnaJ Tax=RBG_16_Planctomycetes_55_9_curated
molecular chaperone DnaJ
Heat shock protein DnaJ domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SX6_SOLUE
RBGRP_128_3
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

991..1479
DNA (489bp) protein (163aa)
Tax=RBG_16_Planctomycetes_55_9_curated
RBGRP_128_4
unknown

Not on your lists

1476..1643
DNA (168bp) protein (56aa)

This feature has no annotations

RBGRP_128_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1645..3492
DNA (1848bp) protein (616aa)
molecular chaperone DnaK Tax=RBG_16_Planctomycetes_55_9_curated
molecular chaperone DnaK
Heat shock protein 70 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SX4_SOLUE
RBGRP_128_6
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3496..3771
DNA (276bp) protein (92aa)
hypothetical protein Tax=RBG_16_Planctomycetes_55_9_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SX3_SOLUE
RBGRP_128_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4065..4481)
DNA (417bp) protein (139aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Planctomycetes_55_9_curated
histidine triad (HIT) protein
HIT family protein n=1 Tax=Lactobacillus pasteurii CRBIP 24.76 RepID=I7J0M8_9LACO
RBGRP_128_8
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(4494..5141)
DNA (648bp) protein (216aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Planctomycetes_55_9_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=3 Tax=Anaeromyxobacter RepID=RL17_ANAD2
RBGRP_128_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5163..5360)
DNA (198bp) protein (66aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Planctomycetes_55_9_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Phycisphaera mikurensis NBRC 102666 RepID=I0IGZ7_PHYMF
RBGRP_128_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5363..6160)
DNA (798bp) protein (266aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Planctomycetes_55_9_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Phycisphaera mikurensis NBRC 102666 RepID=I0IGZ7_PHYMF
RBGRP_128_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(6278..6853)
DNA (576bp) protein (192aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Planctomycetes_55_9_curated
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 n=1 Tax=Thermoanaerobacter tengcongensis MB4 RepID=RS4_THETN
RBGRP_128_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(6951..7331)
DNA (381bp) protein (127aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Planctomycetes_55_9_curated
30S ribosomal protein S11
Ribosomal protein S11 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=D5SQ95_PLAL2
RBGRP_128_13
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(7374..7757)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 Tax=RBG_16_Planctomycetes_55_9_curated
30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MVA8_9PLAN
RBGRP_128_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7992..8207)
DNA (216bp) protein (72aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Planctomycetes_55_9_curated
translation initiation factor IF-1
Translation initiation factor IF-1 n=3 Tax=Halanaerobiaceae RepID=B8D0T2_HALOH
RBGRP_128_15
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8262..9041)
DNA (780bp) protein (260aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RBG_16_Planctomycetes_55_9_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Phycisphaera mikurensis NBRC 102666 RepID=I0IIG9_PHYMF
RBGRP_128_16
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9101..9754)
DNA (654bp) protein (218aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RBG_16_Planctomycetes_55_9_curated
Adenylate kinase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MHK5_9FIRM
adk; adenylate kinase (EC:2.7.4.3)
RBGRP_128_17
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9751..10071)
DNA (321bp) protein (107aa)
Suspect SCG annotation. See neighboring gene [RBGRP_128_18].
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Planctomycetes_55_9_curated
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY n=1 Tax=Phycisphaera mikurensis NBRC 102666 RepID=I0IIH0_PHYMF
RBGRP_128_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(10081..11079)
DNA (999bp) protein (333aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Planctomycetes_55_9_curated
Protein translocase subunit SecY n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SJA4_PLABD
protein translocase subunit secY/sec61 alpha
RBGRP_128_19
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(11144..11587)
DNA (444bp) protein (148aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RBG_13_Planctomycetes_50_24_curated
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=D5SQ92_PLAL2
RBGRP_128_20
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(11618..12190)
DNA (573bp) protein (191aa)
30S ribosomal protein S5 Tax=RBG_16_Planctomycetes_55_9_curated
30S ribosomal protein S5 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q159_9BACT
30S ribosomal protein S5
RBGRP_128_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(12222..12572)
DNA (351bp) protein (117aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_16_Planctomycetes_55_9_curated
50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Isosphaera pallida ATCC 43644 RepID=E8R3U0_ISOPI
RBGRP_128_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(12612..13193)
DNA (582bp) protein (194aa)
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Planctomycetes_55_9_curated
50S ribosomal protein L6 n=1 Tax=planctomycete KSU-1 RepID=I3IM74_9PLAN
rplF; 50S ribosomal protein L6
RBGRP_128_23
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(13193..13591)
DNA (399bp) protein (133aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RBG_16_Planctomycetes_55_9_curated
30S ribosomal protein S8
30S ribosomal protein S8 n=2 Tax=Geobacter sulfurreducens RepID=RS8_GEOSL
RBGRP_128_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(13674..13859)
DNA (186bp) protein (62aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_16_Planctomycetes_55_9_curated
rpsN; 30S ribosomal protein S14
30S ribosomal protein S14 type Z n=2 Tax=Mycoplasma RepID=RS14Z_MYCA5
RBGRP_128_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(13897..14445)
DNA (549bp) protein (183aa)
rplE; 50S ribosomal protein L5 Tax=RBG_16_Planctomycetes_55_9_curated
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 n=2 Tax=Clostridiales RepID=B0P2Y6_9CLOT
RBGRP_128_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(14498..14830)
DNA (333bp) protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_16_Planctomycetes_55_9_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Bacillus halodurans C-125 RepID=RL24_BACHD
RBGRP_128_27
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(14875..15276)
DNA (402bp) protein (134aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RBG_16_Planctomycetes_55_9_curated
50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5U7_PIRSD
RBGRP_128_28
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(15293..15514)
DNA (222bp) protein (74aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RBG_16_Planctomycetes_55_9_curated
SSU ribosomal protein S17p (S11e)
30S ribosomal protein S17 n=1 Tax=Ferrimonas balearica DSM 9799 RepID=E1SLU3_FERBD
RBGRP_128_29
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(15586..15771)
DNA (186bp) protein (62aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 Tax=RBG_16_Planctomycetes_55_9_curated
50S ribosomal protein L29
50S ribosomal protein L29 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RL29_NATTJ
RBGRP_128_30
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


comp(15787..16206)
DNA (420bp) protein (140aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RBG_16_Planctomycetes_55_9_curated
50S ribosomal protein L16 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q150_9BACT
rplP; 50S ribosomal protein L16
Displaying items 1-30 of 31 in total

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